AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02450 ATGATTCAAAATACATATAAAGGGGTAGACTTTGCTCATATTGAGCTTCCATTTCCCTGCTTCCATCTTCACATGGAGATACAACTCATGCTACCGTCGCCGGCGGTCGATTTCAGCTGCGAAAGCACCAACACTACGCCGTACGTCACCGCACCTTCTACCCCACACCGCTTCCCAAATTTCTTCTACACCGCACCCACAAGCCCAATCCACTCCCTCGCCATCTCCTTTCATCAGGAAGATGAAGATCGTCATGAAGACGATAAGGATTTTGCATTCAATTTCACCGGAGAACTAGAACCACCTTCTATATCCGCCGCCGACGAGCTCTTTCATTGCGGCAAGATCAAGCCGTTAAAGCCTTCTATCTCCGACGACCCGCCTAAATCCCCACCCTCACGTTTCACTCAAGCGTTTTCCCCTCGCCGTAAAAAGAAAGATTTTGACGCTTTCACTGAGGCATTAACACAAACATCTGGTGAACAAACGCACACCAGTCAAAACCCATCTAAACGAGGAAGGGAATCGACGAGAAAAACCAAAATTAAAGACAAAGTATCACCGTCGTCATCACGGTTTAGAATCTCCGATATTTTATCCGAAGAAGAACATCACAACCAGAGAAACCCAACAAATCAATCGTCGTCGTTAACGTGGTACAATAAGTGGAACCTTAAAAACCTGCTATTGTTTCGAAGCACGTCGGAGGGAAGTGCGAGGAGGAGCAAAGACCCGGTGAATAAATATTCGAGGATAAGGAAAGACGGCGGCGACGCCGGTGAGGATGTAAGGAATTCAAGCTTTAGAAGTACGGAGAGTTTGGGTTCGAGTAGGAGGGTGATGAGGAAGGTTTCAGCGCATGAAATACATTACACGGCGAACAGAGCGGTGGCGGAAGAGATGAGGAAGAAGACGTTCTTGCCGTATAAATCTGGGTTGTTAGGTTGCTTGGGGTTCCATAACAATGGCGGAGGGAGTGTTCATGAGATTTCAAGAGGGATCACTTCTGTTATGAAGCAACGAGGATACTGA 1032 47.09 MIQNTYKGVDFAHIELPFPCFHLHMEIQLMLPSPAVDFSCESTNTTPYVTAPSTPHRFPNFFYTAPTSPIHSLAISFHQEDEDRHEDDKDFAFNFTGELEPPSISAADELFHCGKIKPLKPSISDDPPKSPPSRFTQAFSPRRKKKDFDAFTEALTQTSGEQTHTSQNPSKRGRESTRKTKIKDKVSPSSSRFRISDILSEEEHHNQRNPTNQSSSLTWYNKWNLKNLLLFRSTSEGSARRSKDPVNKYSRIRKDGGDAGEDVRNSSFRSTESLGSSRRVMRKVSAHEIHYTANRAVAEEMRKKTFLPYKSGLLGCLGFHNNGGGSVHEISRGITSVMKQRGY 343
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02450 343 MobiDBLite consensus disorder prediction 118 143 - -
Laca7g02450 343 PANTHER OS07G0619500 PROTEIN 49 321 - -
Laca7g02450 343 MobiDBLite consensus disorder prediction 234 280 - -
Laca7g02450 343 MobiDBLite consensus disorder prediction 155 194 - -
Laca7g02450 343 MobiDBLite consensus disorder prediction 264 278 - -
Laca7g02450 343 MobiDBLite consensus disorder prediction 171 194 - -
Laca7g02450 343 Pfam Protein of unknown function (DUF1645) 107 308 IPR012442 -
Laca7g02450 343 MobiDBLite consensus disorder prediction 155 170 - -
Laca7g02450 343 MobiDBLite consensus disorder prediction 237 262 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02450 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
115905 Laca5g03208 Laca7g02450
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr4:178872421 Laca7g02450 Laca-Chr7:116276138 dispersed
Laca Laca-Chr5:208619547 Laca7g02450 Laca-Chr7:116276138 transposed
Laca Laca-Chr9:158788105 Laca7g02450 Laca-Chr7:116276138 transposed
Laca Laca-Chr1:16006957 Laca7g02450 Laca-Chr7:116276138 wgd
Laca Laca-Chr5:195726968 Laca7g02450 Laca-Chr7:116276138 wgd