AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02455 ATGGCCCCTGCAAAGCCCAGCATTCGGTCGATCTCGCAACAAGCATTCGATGAAATGGTTAAAGAAAACATAGACGATCTAGGTATGGAGCCAACGGAAGCCCTAAGCGACGCCATCGAAACCCTCACTCTTCAAGGCGTAGATCTCTCTGGTATCGTCACCTCTACACTCCCCGGAGAAACCAATCCGGTGATCCAATCACTTGACAGAATCAAAGAATTACAGAGTTCGGATTGGACAGACAAAGCAGTCTTAGACGAGGCGCGATGTTTGTTAGATCATTTGACGGAATTGTCCCGTGTTGAGGGATCTGGAAATGCTGCGATTGCTACGAGAAACGGAGGTGTAGAATTGATGTGCTCTGTTTGTTCGAAGCTTCGCGATATTGGCCGTGATTCTGTACTTGTATCGGCTTTGAATGCATTGGCTGCATTTCTCCATGATCTTCAAAGTACAGAAACTTTCAGGCAAAGTGGAGGACCAAAACTCGTGATTGGTATCCTAACTGATGAAACTCAAAATGTAAACATCTTGAACAGTGCCTTCTCTGTTGTTGCTGCTTCTGCAACTGGTAATGAGGTTCTCAAGGAAGCATATGTCGAACTACACATAGATGAGTTAATAGTTAAAATCATGAAGAACTATAAAAAAGGAAGCATCTCAAGTTTATATGATGCCATTCGAGTGCTTTTAGCAGCTGATGATACCCGTGTAATCGCTTCACAAGTTTATGGGTATGCTCGAAAATTTGCTAAACTTGGAATTGCTGAAGCTCTTGCTGAGTCACTTGATGATGAACTTAACTCATCAAGCCTGGTTTCAATAACAATTGCACTAAAAGCCATTTCAGTTAATGATGAAATATGCAGATCAGTTGCTGAAAAAGGTGGTATAGATTCACTACTCAATACTATCGATGAATCTGGCATACAAGGGAACAAAACTGTAGCCAAATCTTGCTGTTCTTTGTTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCTATAATTGAAAGGAGAGGTTTGAATAGACTCATCACACTTTCCAACAGACTTCATGATGATCCTTCTGTTATCCAAGAGGTGATGACCATCATAAGCACCCTGTGCCTGCGCTCACCTGATCATGCAGCCATGGCCATGGAAACTGGAGCAGGAGAGCTTGCAATTCAAACTATGAAGAAGTTTCCTGAAGCATCTCAGTTGCAGAAATTTTCATGTCTCATGATTCGTAATCTTGTTGCTAGGAATACAGAAAACAGGTCTATTTTGTTGAATAATGGTATTGAGAAGATGATAAGGAATGCGAAAGAAAACCATAAAAGTTGTAGAGAAGCTGGGACTGATGCACTTAGAGACTTGGGGGTTGAAAATTATAATTCATAG 1389 41.47 MAPAKPSIRSISQQAFDEMVKENIDDLGMEPTEALSDAIETLTLQGVDLSGIVTSTLPGETNPVIQSLDRIKELQSSDWTDKAVLDEARCLLDHLTELSRVEGSGNAAIATRNGGVELMCSVCSKLRDIGRDSVLVSALNALAAFLHDLQSTETFRQSGGPKLVIGILTDETQNVNILNSAFSVVAASATGNEVLKEAYVELHIDELIVKIMKNYKKGSISSLYDAIRVLLAADDTRVIASQVYGYARKFAKLGIAEALAESLDDELNSSSLVSITIALKAISVNDEICRSVAEKGGIDSLLNTIDESGIQGNKTVAKSCCSLLSKLAGSDFNKSAIIERRGLNRLITLSNRLHDDPSVIQEVMTIISTLCLRSPDHAAMAMETGAGELAIQTMKKFPEASQLQKFSCLMIRNLVARNTENRSILLNNGIEKMIRNAKENHKSCREAGTDALRDLGVENYNS 462
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02455 462 SUPERFAMILY ARM repeat 112 456 IPR016024 -
Laca7g02455 462 Gene3D - 61 462 IPR011989 -
Laca7g02455 462 PANTHER UNCHARACTERIZED 5 456 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02455 K24166 armadillo repeat-containing protein 6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:116450130 Laca8g00510 Laca-Chr8:14752839 dispersed