AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02480 ATGAAGGGAGCTAAGAATTACTTGAGGATGTCGACTGATCCAACTCTATCAGAAGCAGCTTCCAAATTAATCAACTCCGATTTGAAAGATATCGGAGAAGCTACGAGGAAATTGGCTGATCATGTCATCAAGCTCGGAGTCAGCGGTGGTTTCATCACTACCTGCCTTCAATGGTTCGCTTGCTTCGCCGCCATTTATTTGCTGATACTCGATCGAACAAACTGGAGGACGAAGATCCTCACTTCACTTTTGGTCCCCTACATCTTCTTGACTCTTCCTGACTGGCTCTTCGGAATTTTGCACGGAGACATCGGGAAATGGATCACTTTAGTCGGAGTCGTATTGCGCCTCTTCTTCCGTGAACATTACCCAGAATACCTAGAGTTGCCGGGATCTTTACTCCTTTTGGTTGTGGTAGCTCCAAACTTCGTCGCCGGCTACGTCAGAGTAGGGTGGATCGGAGTGATTGTCTGCTTGGTTATCGGATGCTACTTGCTTCAAGAACACATCAGAGCTTCTGGAGGATTCAAGAACGCTTTCACCAAGAGCAATGGTATTTCCAACACCATCGGTATCGTTCTCTTGTTCGTCTTCCCTGTCTGGGCTATAATCGGGTTAATATTCTGA 627 46.57 MKGAKNYLRMSTDPTLSEAASKLINSDLKDIGEATRKLADHVIKLGVSGGFITTCLQWFACFAAIYLLILDRTNWRTKILTSLLVPYIFLTLPDWLFGILHGDIGKWITLVGVVLRLFFREHYPEYLELPGSLLLLVVVAPNFVAGYVRVGWIGVIVCLVIGCYLLQEHIRASGGFKNAFTKSNGISNTIGIVLLFVFPVWAIIGLIF 208
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02480 208 Pfam Cold acclimation protein WCOR413 18 195 IPR008892 GO:0016020(InterPro)
Laca7g02480 208 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 8 203 IPR008892 GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02480 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:118019989 Laca7g02482 Laca-Chr7:118026144 dispersed
Laca Laca-Chr7:118019989 Laca7g02481 Laca-Chr7:118022647 tandem