AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02494 ATGGAGCTTCGGTCAGTTCAGTCGCCGGTCGTTAGTAGCATACCTGCAAAAGGCTTTACAGAATCGCAGAAATTTATATGCTACCGCCAACTTATCAAATCGTTCGGAACGAAGAGAATTGTTCAGTCAAATGCTATCAAGCTCAAACCTGTTCGATTCAAGGTTCAAGCCGCAGGTGCAACAACAACTGGTTTGCAACCAACTGAAACAAAAACAAAAGATGGTGAAGAAGATGGAAATCTCATCTTTGTTGCAGGAGCAACTGGTAAAGTTGGTTCACGAACAGTAAGGGAGCTTCTGAAACTAGGATTTAATGTTCGAGCTGGTGTACGAAGCATTCAAAGAGCAGAATCTTTGGTCAAAAGTGTGAAGCAAATGAAGATTGATGAAGCATTATCTGATGGAACTCAGCCTATAGAAAAGCTTCAACTTGTGGAGTGTGATTTGGAGAAACCAGAGGAGATAAAGTCTGCATTGGGAAAAGCTTCAACAGTTATATGCTGCATTGGTGCTAGTGAAAAGGAGGTATTTGATGTTACTGGACCTTACAGAATTGACTTTCAAGCCACAAAAAACCTTATTGATGCAGCTACTGCTGCAAAAGCAAAACACTTTATTTTGGTTACTTCTTTGGGAACAAACAAGTTTGGATTTCCAGCTGCTATATTGAATTTATTCTGGGGAGTTTTATGCTGGAAAAGAAAGGCTGAAGAAGCACTTCTTGCTAGTGGGATTCCTTACACTATAGTGAGACCTGGTGGAATGGAGCGCCCTACAGATTCCTTCAAGGAAACACATAATCTTACACTCTCTCTTGAAGATACTTTATTCGGTGGTTTAGTATCAAATCTTCAGGTGGCTGAACTCCTTGCATTTATGGCAAGAAACCCAAGTCTCTCATATTGTAAAGTAGTGGAAGTGGTTGCAGAAACAACTGCACCATTGACTCCCATGGCTGACCTTCTTACAAAAATACCACCTCAACGTGCTATACCTTACAAGCCAAAGGAGCCAGAAGCTGTTAAAGTGTCTGAACCTGTTAAGAGCACGAGTTCTGAGAGTTCAAGTGTTGTCATTGAGTCAAAAACAGCTCCACCAAGGCCACTCTCCCCATATACAGCTTATGAAGGTTTGAAACCCCCGGTATCCCCGATTCCAACGCCACCTGGCGGCAGTAAGGTGGTGGTAGAAGCAGTAACAACCACTACTCCTCCCACTGACACCGAAACCACCACAAAAGTGGAAACCATAGCTACTACAGATGAACCTACAGCACAAGTGGCTGTAGAAGTGCCAAAAACCAGGCCTCTCTCTCCTTATGCTGCTTACGAGAATCTAAAGCCACCAACCTCTCCAACCCCAACACCAAGCGGATCCAAACAAACACCATCGTCTTCCTCTCCACCACCAGAAGTTGCATCAGAATCCACTACGGTCGTTTTCACCTTTGAAAACATTGAAGTCAAAGAGGATCCTCCTCAAACTTTGACTTCTGGAAATTCACCTTACCTTGTATATGACAATCTGAAACCCCCTACATCACCATCACCATCTTCAAGCTCCCCATTGGTGTCTCCACCAACAACTGCGGTGTCTCCACCACCGGCTGCCGCCACAGACAACGGGTCTCCGGTTGCTTCGTCTCCAGAAAACACCTCTGATGTCACAACGGTGAAGCCAAGGCCACTTTCACCTTATGCTATGTATGAAAGCTTAAAGCCTCCAACTTCTCCGATTCCTTCCACCCCTCAGTAA 1755 44.39 MELRSVQSPVVSSIPAKGFTESQKFICYRQLIKSFGTKRIVQSNAIKLKPVRFKVQAAGATTTGLQPTETKTKDGEEDGNLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSIQRAESLVKSVKQMKIDEALSDGTQPIEKLQLVECDLEKPEEIKSALGKASTVICCIGASEKEVFDVTGPYRIDFQATKNLIDAATAAKAKHFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLSLEDTLFGGLVSNLQVAELLAFMARNPSLSYCKVVEVVAETTAPLTPMADLLTKIPPQRAIPYKPKEPEAVKVSEPVKSTSSESSSVVIESKTAPPRPLSPYTAYEGLKPPVSPIPTPPGGSKVVVEAVTTTTPPTDTETTTKVETIATTDEPTAQVAVEVPKTRPLSPYAAYENLKPPTSPTPTPSGSKQTPSSSSPPPEVASESTTVVFTFENIEVKEDPPQTLTSGNSPYLVYDNLKPPTSPSPSSSSPLVSPPTTAVSPPPAAATDNGSPVASSPENTSDVTTVKPRPLSPYAMYESLKPPTSPIPSTPQ 584
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02494 584 MobiDBLite consensus disorder prediction 457 483 - -
Laca7g02494 584 MobiDBLite consensus disorder prediction 541 559 - -
Laca7g02494 584 MobiDBLite consensus disorder prediction 515 533 - -
Laca7g02494 584 Pfam NAD(P)H-binding 86 297 IPR016040 -
Laca7g02494 584 CDD SDR-a5 82 311 - -
Laca7g02494 584 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 1 583 IPR044719 -
Laca7g02494 584 MobiDBLite consensus disorder prediction 420 584 - -
Laca7g02494 584 FunFam Protein TIC 62, chloroplastic 78 328 - -
Laca7g02494 584 Gene3D - 80 326 - -
Laca7g02494 584 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 326 IPR036291 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02494 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr5:212327791 Laca7g02494 Laca-Chr7:118641088 dispersed