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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02500 ATGTCGATCCTAGGTTCAAATATCCCGAGCGAGGTTGGCCTGAAGTTGCTTCTTTGTCCACTTGGTTCCAACATTGTGCTAAAAACAGCATGCTGTTCTGTAGGTGTTATTTTACCTGTTTACTCTACATTTAAAGCCATTGAAACAAATAATTCAACTGATCAACAAAAATGGCTTTTATACTGGGCAGCATATGGGAGTTTTAGCATTGCAGAAACATTTGCAGATAAAATTATCTCATGGTTTCCACTATACCAATACATGAAGTTTGCTTTTCTTGTTTGGCTTCAACTTCCCACTACCAATGGTGCTAAACATTTATACATGAGTCATTTACGTCCTTTCCTTTTGAGGCATCAAGCTAATCTTGATCAAATTGTGGGAATCTTGTACAATGAAACAGGTAAATTTGTTAGTGCTCACGAAGGGGAATTTAGATTCATGAAGGCAATTGCCCTGAAGATTTTGATATCAGCAAAACATTTTATCAACGAAAGCAGTCAACCGGTCCCACCTCCAGAGGGAAGAATCACAGGCTTAGGCGAACAAATAGACAGCTCTGATGATGATGATGATGATATTGATGATATTGATGGTTATGTAACTGTGCCTGCAACTTAA 621 38.16 MSILGSNIPSEVGLKLLLCPLGSNIVLKTACCSVGVILPVYSTFKAIETNNSTDQQKWLLYWAAYGSFSIAETFADKIISWFPLYQYMKFAFLVWLQLPTTNGAKHLYMSHLRPFLLRHQANLDQIVGILYNETGKFVSAHEGEFRFMKAIALKILISAKHFINESSQPVPPPEGRITGLGEQIDSSDDDDDDIDDIDGYVTVPAT 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02500 206 MobiDBLite consensus disorder prediction 165 206 - -
Laca7g02500 206 MobiDBLite consensus disorder prediction 184 198 - -
Laca7g02500 206 PANTHER HVA22-LIKE PROTEINS 35 130 IPR004345 -
Laca7g02500 206 Pfam TB2-DP1, HVA22 family 39 115 IPR004345 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02500 K17279 receptor expression-enhancing protein 5/6
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Event-related genes

Select Gene_1 Gene_2 Event_name
116370 Laca7g02500 Laca9g03463
116371 Laca7g02500 Laca9g03465
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr6:32460318 Laca7g02500 Laca-Chr7:118734273 dispersed
Laca Laca-Chr7:118734273 Laca9g03465 Laca-Chr9:144198241 dispersed
Laca Laca-Chr7:118734273 Laca9g03463 Laca-Chr9:144181315 wgd