AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02515 ATGGATGAGAAGTTGATTCAGAGATTGGAGTCCGCCATAGCACGGCTGGAATCGCTCTCCCCCGGTTCCAAGCCCCCATCCGGCACACTTGACTCCGTATCAGCGGCATCGGAACCGTCGATCGTCGCATACGACGATCTGCTCGTGGAATACGTCGTTAAGGTATCCCTTGCTGCGGAGAAGATCGGCGGACAAGTTCATGATATTACGATTGTTCTCAGTCAGGCTTTCGCTACTCAGAAGGAGCTTCTCATGAAGATCAAACAAACTCAGAAACCTGATGCGGGAGGAATGGCAGTATTTTTAAAACCATTAAATGATAAATTAGCTCAAGCAAATGACATGTCAGAAGGAAAGCGTTCTGATTTCTTCAACCACTTAAAAGCTGCTTCTGAGAGTCTATCAGCTTTAATCTGGATTGCATATACAGGGAAAGGCTGTGGAATGAGCATGCCTATTGGACACGTGGAAGAATGTTGGCAATCAGCTGAATTTTACAACAACAAGGTTCTTGTAGAATACAAAAATAAAGATCCATATCATGTGGAATGGGCAAAAGCTCTTAAGGAACTTTATGTACCAGGGTTAAGGGATTATGTGAAAGCTCACTATTCTTTGGGACCTTTATGGAGTACAACGGGTGCAGTTGTTTCTGCCCCAAAATCTGCCCAACCATCTGCCCCAAATCCTCCATCAGCTTCACTTGCCAACTTGGCATCTTCTTCTTCATCCCGCCCAAAGCAAGGCCAAGGAATGGCTGCTGTTTTTCAGGAAATTAGTTCAAAGCCGGTTACTTCTGGATTAAGAAAGGTTACAGATGATATGAAAACCAAAAACCGGAAAGATAGAGGAGGGTTTGTGAGTTCAGGCGAAAAAGAAGTTCACGACAATGCACCAAAAGCTGCTCCTAAAACTGGGCCTCCAAAGCTTGAGCTTGTAATGGGTCGCAAATGGGTTGTTGAGAATCAAATTGGTGTGAAGGATTTGTCGATTGATGATTGTGATCCTAAGCAGACTGTATATATTTTTGGATGCAAAGATTCAGTTCTACATATCAAAGGAAAAGTCAACAACATCACTGTTGACAAATGCACAAAAATGGGAGTTGTATTCACAGATGTGGTTGCTGCTTTTGAAACTGTTAACTGTAGCAGTATTGAGGTGCAATGCCAGGGTGCAGCCCCTACAATTTCTATTGACAACACAGCAGGGTGCCAGCTGTACTTGAGCCGAGAGTCTCTAGAAGCTTCTATAACAACTGCCAAAGCAACTGAAGTTAATGTCATGGTGCCTTCCTCAGATCCTGATGCTGATCTGGCGGAACACCCGTTGCCACAGCAATACATTCACACTTACCAAGATGGAAACTTTGTTACAAACCCTGTCTCACACTCTGGAGGCTAA 1404 44.16 MDEKLIQRLESAIARLESLSPGSKPPSGTLDSVSAASEPSIVAYDDLLVEYVVKVSLAAEKIGGQVHDITIVLSQAFATQKELLMKIKQTQKPDAGGMAVFLKPLNDKLAQANDMSEGKRSDFFNHLKAASESLSALIWIAYTGKGCGMSMPIGHVEECWQSAEFYNNKVLVEYKNKDPYHVEWAKALKELYVPGLRDYVKAHYSLGPLWSTTGAVVSAPKSAQPSAPNPPSASLANLASSSSSRPKQGQGMAAVFQEISSKPVTSGLRKVTDDMKTKNRKDRGGFVSSGEKEVHDNAPKAAPKTGPPKLELVMGRKWVVENQIGVKDLSIDDCDPKQTVYIFGCKDSVLHIKGKVNNITVDKCTKMGVVFTDVVAAFETVNCSSIEVQCQGAAPTISIDNTAGCQLYLSRESLEASITTAKATEVNVMVPSSDPDADLAEHPLPQQYIHTYQDGNFVTNPVSHSGG 467
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02515 467 Gene3D - 40 215 IPR036222 -
Laca7g02515 467 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 307 466 IPR036223 -
Laca7g02515 467 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 40 231 IPR036222 -
Laca7g02515 467 Pfam Adenylate cyclase associated (CAP) C terminal 307 464 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Laca7g02515 467 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Laca7g02515 467 Pfam CAP, N-terminal domain 44 207 IPR053950 -
Laca7g02515 467 FunFam Adenylyl cyclase-associated protein 40 215 - -
Laca7g02515 467 FunFam Adenylyl cyclase-associated protein 306 466 - -
Laca7g02515 467 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 3 465 IPR001837 GO:0003779(PANTHER)|GO:0003779(InterPro)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Laca7g02515 467 MobiDBLite consensus disorder prediction 219 253 - -
Laca7g02515 467 Pfam CAP N-terminal conserved motif 3 34 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
Laca7g02515 467 SMART carp 383 420 IPR006599 -
Laca7g02515 467 SMART carp 345 382 IPR006599 -
Laca7g02515 467 ProSiteProfiles C-CAP-cofactor C-like domain profile. 307 444 IPR017901 -
Laca7g02515 467 MobiDBLite consensus disorder prediction 219 250 - -
Laca7g02515 467 MobiDBLite consensus disorder prediction 267 308 - -
Laca7g02515 467 Gene3D - 306 466 IPR016098 -
Laca7g02515 467 MobiDBLite consensus disorder prediction 269 299 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02515 K17261 adenylyl cyclase-associated protein
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
115897 Laca5g03141 Laca7g02515
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr5:194047455 Laca7g02515 Laca-Chr7:119928065 wgd