Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Laca7g02541	ATGGCAAAAAGATCAGTTGCCGCCTATGCAATCCTTCTCCTCCTCTTCGTTCTTGCCATTTCAGAAATCGGTACAGTGAAAGGAAAATTATGTGAAAAGGTGAGCCAGACTTGGTCTGGAAAGTGTAATTCCAAGAAGTGTGACAAAAAGTGCATTGAATGGGAGAAGGCCATCCATGGAGCTTGTCACAAGCGTGAAGGGAAAGGCGGCTGCTTCTGCTACTTTGACTGTGCCAAGAAACCTCCAAAAGATGCAAAACCAGTTCCTCCTGATGCCGTACCACCGCCTCCAAAAGATGGTTCCCCTCCAAAAGATTCGCCTCCTGCTGATGGCGGCGGTTCCCCTCCTCCGGCTGATGGCGGCGGCTCCCCTCCTCCGGCTGATGGCGGTGGTGCCCCTCCTGCTCCTTCCCGACATTAA	420	52.38	MAKRSVAAYAILLLLFVLAISEIGTVKGKLCEKVSQTWSGKCNSKKCDKKCIEWEKAIHGACHKREGKGGCFCYFDCAKKPPKDAKPVPPDAVPPPPKDGSPPKDSPPADGGGSPPPADGGGSPPPADGGGAPPAPSRH	139

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Laca7g02541	139	SUPERFAMILY	Scorpion toxin-like	29	77	IPR036574	-
	Laca7g02541	139	MobiDBLite	consensus disorder prediction	87	139	-	-
	Laca7g02541	139	PANTHER	DEFENSIN-LIKE PROTEIN 1	1	77	-	GO:0006952(PANTHER)
	Laca7g02541	139	Pfam	Gamma-thionin family	29	77	-	-
	Laca7g02541	139	SMART	gth-4	30	77	IPR003614	GO:0006952(InterPro)
	Laca7g02541	139	Gene3D	-	27	77	IPR036574	-
	Laca7g02541	139	MobiDBLite	consensus disorder prediction	82	139	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Laca7g02541	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Laca	Laca-Chr7:121280232	Laca7g02541	Laca-Chr7:121460653	dispersed
	Laca	Laca-Chr7:121332091	Laca7g02541	Laca-Chr7:121460653	dispersed
	Laca	Laca-Chr7:121460653	Laca7g02543	Laca-Chr7:121593844	dispersed
	Laca	Laca-Chr7:121460653	Laca7g02542	Laca-Chr7:121477109	tandem

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lacanog00670	.	4	78	Plant Defensins gene family	AT1G19610	43.421	1.58e-16	67.4
	Laca7g02536	.	9	68	Plant Defensins gene family	AT1G19610	38.333	2.09e-12	57.0
	Laca7g02537	.	3	78	Plant Defensins gene family	AT1G19610	44.737	8.34e-18	71.2
	Laca7g02538	.	1	78	Plant Defensins gene family	AT1G19610	47.436	7.74e-21	80.9
	Laca7g02539	.	3	78	Plant Defensins gene family	AT1G19610	46.053	3.88e-18	72.4
	Laca7g02541	.	3	78	Plant Defensins gene family	AT1G19610	43.421	4.30e-20	77.0
	Laca7g02542	.	3	78	Plant Defensins gene family	AT1G19610	44.737	8.43e-21	78.6
	Laca7g02543	.	7	78	Plant Defensins gene family	AT1G19610	47.222	1.02e-15	67.0
	Laca7g02544	.	1	78	Plant Defensins gene family	AT1G19610	42.308	7.41e-16	65.9