AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02565 ATGGCTAATATTTCAATTCGCAATGCTGCTGCTTCTATCATCCATTTCGAGAAAGTAACTAGTTCTAATCTACCACAATCTCCGATTGAGTCTCCTTTGAATCCCCAACCTGTTCTTCCACTCCTTGCACCTTCACCATTGACGCCATTCACAAATATCAGCATGCCAAATCTATCAGGAAACTGTCCACTAAACTTTTCAAATGCCAAAACTGCCCTCACCACAACAGCAATCGATTGCTGGGGTTCACTAGCTCCATATCTAGCCAACTCAATATGTTGCCCTCAACTCGATGCCACAATCAAGATCTTAATAGCCCAATCTAGTTTCTCTTCAGGAAAACTTTCCCTCAACAAAACTCATTCCAAAAACTGTCTTTCAGACATCACACAACTTCTAGAAGCTGAAGGCTCTAACCACCAACTTCTAGAAATCTGCTCAATCCACCCTTCTAACCTCTCAGATTCTTCTTGCCCTTTTGTTCATCTTGCTGATATCGAAAACACCATCAACATTCCTACAATCATTGAATCTTGTGAAAAGATTGATCCAGTGATAGAGTGTAGGGATAAAATCTGTCAAAGTGCGATTACAGATGCTGCTGTTAAGATTGCTTCTAGAAAGATTGGAAGTCGTTTATCAGGTGATGACGTGGCCATGGTTGAAGATTGTAAGAAAATTGTTCTTCGATGGGTTGCAAGTAAATTTGATTCATCATATGCTAATAAAATTCTTCGTGGGATTTCGAGTTGCAAGATTAACAAAGTTTGTCCTCTTGTTTTTCCCGACATGAAAAACATTTCGAATGAATGTGGAAACAAGATTAGGAGCCAAAACACGTGTTGTGATGCCATGGAGAAGTACATGACTTATCTACAAAATCAAAGCTTCATTACAAATTTGCAAGCATTGAATTGCGCACATTCGCTTGCTGAAAATTTGCAAAAACTTAATGTCTCCAATGACATATACAACATTTGTCACATAAAACTCAAAGATTTCTCCCTCCAAGTTGGATCACAAGGGTCGGGTTGCCTTTTTCCAAGCTTGCCTTTTGATGTGACGTATGAGCAAAGCACAGGAATTGATTTCAGATGTGATCTTAATGATAACGTTGAAGCGCCATGGCCTTCTTCTTTTACTTATTCTCCTTCTCCAATAAATATTCCAGCACTTCCTAAAGCAACATCTGATCAGAGTGGGCTGCGGAGTACACTGTTGCTTTCGACTTTGTTGCTGCTCAGCTTCTTCACGTGGTGA 1260 39.84 MANISIRNAAASIIHFEKVTSSNLPQSPIESPLNPQPVLPLLAPSPLTPFTNISMPNLSGNCPLNFSNAKTALTTTAIDCWGSLAPYLANSICCPQLDATIKILIAQSSFSSGKLSLNKTHSKNCLSDITQLLEAEGSNHQLLEICSIHPSNLSDSSCPFVHLADIENTINIPTIIESCEKIDPVIECRDKICQSAITDAAVKIASRKIGSRLSGDDVAMVEDCKKIVLRWVASKFDSSYANKILRGISSCKINKVCPLVFPDMKNISNECGNKIRSQNTCCDAMEKYMTYLQNQSFITNLQALNCAHSLAENLQKLNVSNDIYNICHIKLKDFSLQVGSQGSGCLFPSLPFDVTYEQSTGIDFRCDLNDNVEAPWPSSFTYSPSPINIPALPKATSDQSGLRSTLLLSTLLLLSFFTW 419
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02565 419 PANTHER GPI-ANCHORED PROTEIN 26 412 IPR040336 GO:0005886(PANTHER)
Laca7g02565 419 Pfam SPARK 59 207 IPR043891 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02565 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr2:61727214 Laca7g02565 Laca-Chr7:122812542 dispersed