Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02572 | ATGATTTACCTGTTCTTCGCGGTTTTATTCATCGAAATGTTGACGATTCTGTTACTTTTGTTCAAAACCCCACTCCGAAAGCTTTTGATAATCGGGTTAGATCGTGCGAAACGGGGAAGAGCTCCATTGGTTGTAAAATCCGTCGCCGCCACCTTCTTCATCATGATGATGTACAACGTTTACACCGTAATGGAAATCCAGAGGCGCCCCGCCGACGTCAATAATCCCACCGATCAAATCATCCTCGCTTACCACATGCTCGAAGCTGCTCTCATGGGATTCTCGCTTTTCCTATCACTAATGATAGATCGACTCCACCATTACATTCGTGAGCTTCGAATACTGAGAAAAACAATGGAAACCACAAAGAAACAAAATCGAGCAGCTGAAGAGTTTAAGAACAAAGGAGCAGATGAAGTGAGACATCTGAATGAAGAAATGATAAGAATGAGGGGAGAAATGAAGAAACTGGAAACCAAATATTCAGCAATGGAAAAAGAAGTGAAATCTGCAGAAGCCAATTCTCTTGCACTTAAGCATCAATCTGAAGGATTCCTTCTTGAATATGATCGCTTGTTGGCTGAAAACCAGAATCTTAGAGATCAACTTCGTGCCATTGATGATAGCTTGTCTCATGCCAATGGAAAGAAGGATACATGA | 660 | 41.82 | MIYLFFAVLFIEMLTILLLLFKTPLRKLLIIGLDRAKRGRAPLVVKSVAATFFIMMMYNVYTVMEIQRRPADVNNPTDQIILAYHMLEAALMGFSLFLSLMIDRLHHYIRELRILRKTMETTKKQNRAAEEFKNKGADEVRHLNEEMIRMRGEMKKLETKYSAMEKEVKSAEANSLALKHQSEGFLLEYDRLLAENQNLRDQLRAIDDSLSHANGKKDT | 219 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02572 | 219 | PANTHER | BCR-ASSOCIATED PROTEIN, BAP | 1 | 200 | IPR008417 | GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER) | |
| Laca7g02572 | 219 | FunFam | B-cell receptor-associated protein 29 | 136 | 199 | - | - | |
| Laca7g02572 | 219 | Pfam | Virus-capping methyltransferase, C-terminal | 45 | 119 | IPR048398 | - | |
| Laca7g02572 | 219 | Coils | Coil | 140 | 181 | - | - | |
| Laca7g02572 | 219 | Coils | Coil | 189 | 209 | - | - | |
| Laca7g02572 | 219 | Gene3D | - | 136 | 199 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02572 | K14009 | B-cell receptor-associated protein 31 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 115839 | Laca5g02974 | Laca7g02572 | |
| 116380 | Laca7g02572 | Laca9g03420 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:123797100 | Laca9g02997 | Laca-Chr9:121482514 | dispersed | |
| Laca | Laca-Chr8:63312484 | Laca7g02572 | Laca-Chr7:123797100 | transposed | |
| Laca | Laca-Chr5:187292871 | Laca7g02572 | Laca-Chr7:123797100 | wgd | |
| Laca | Laca-Chr7:123797100 | Laca9g03420 | Laca-Chr9:141487544 | wgd |