AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02573 ATGACCAAACTACCCTTCATCATCGTCTCGGTCATATCCATTCTTACATTTTTGAAAGCCGATGAATTAGGCGAGCTCAAACTGTCCTCCATGACACTTTACTTCCAAGACTATTTTGGTGGAGCTAATGCAACGATGAAACCTGTCACGTTTTCTGGCGATGCATGGTCGTTCAAGCAATTTGGGACGATATTTTGTACTGATGATGTGATAACTGTAACAATGGATCAGGGTTCGGCTCAAGTGGGTCGAGCTCAAGGTATTTATGTGACATCTGCGTTGGATGGGTCCAACTCACATGTCATGATATCTGTTGTGTTCACTAATGATGAGTTTGGTGGTAGCACGTTGGAGGTGCAAGGGACTAGCAAGCAGTTTGAGAGGGTGAGAGAGGTGGCGGTGGTTGGTGGTACTGGAAGATTTCGGTTGGCTAGAGGTTATGTCACTTTTGAGACCGTTCATCTTGATTTGTCGTTATCGTACTCGATCATTGAGGGCAATTTTACTATTTGGCATTATTAA 522 43.87 MTKLPFIIVSVISILTFLKADELGELKLSSMTLYFQDYFGGANATMKPVTFSGDAWSFKQFGTIFCTDDVITVTMDQGSAQVGRAQGIYVTSALDGSNSHVMISVVFTNDEFGGSTLEVQGTSKQFERVREVAVVGGTGRFRLARGYVTFETVHLDLSLSYSIIEGNFTIWHY 173
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02573 173 Pfam Dirigent-like protein 29 170 IPR004265 -
Laca7g02573 173 Gene3D - 18 167 IPR044859 -
Laca7g02573 173 PANTHER NUCLEOPORIN-RELATED 8 167 IPR004265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02573 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:123798936 Laca8g03652 Laca-Chr8:152608597 dispersed
Laca Laca-Chr7:123798936 Laca9g00697 Laca-Chr9:16064500 transposed