AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02596 ATGGCATTGAATAGAGCTGGATCGTGTAATCCGGCCGTCGTGAAGATCGGAATTACTTTCTTGGGGCTGTGTTTGGTGGGTTATCTACTCGGTCCACCTTTATACTGGCATGTTCTTGAAGGGTTAGCCGCCGTACGCCGCTCATCCTCCGCCGCTTCCTGCCCTCCCTGCAATTGCGACTGCGATTCTCAGCCGCTCCTCTCCATTCCTCAAGCATTAAGCAATGGTTCATTCACAGATTGTGCAAAACATGACCCTGAAGTAACGGGAGAAACAGAGAAGAATTTCTCAGAGCTTCTATCAGAAGAACTAAAGCTTCGTGAAGCTGAATCTTTAGAAAGTCAACAACGTGCTGACATGGCACTTCTTGAAGCCAAAAAGCTAACATCACAGTATCAGAAAGAAGCTGATAAGTGTAATTCAGGAATGGAAACTTGTGAAGAAGCGCGTGAAAAAGCCGAATTGGCTTTATTATCACAAAAACAACAAACTGAAATGTGGGAATTAAGAGCTCGACAAAAAGGGTGGAAGGAAAGCAGCAATGCAAGGTTATCGGTGGTGGTGAGGAAAGAAGGTTGGGGGTTGATGGCAATGTTTGTGGTGGTGGTGATTGTTAATAGCAGTGGTCAACGACATGGTGGCTGCGGCGACTACTATGACGAGAAACATGGACCGACTGAGTTGAGTTAA 690 46.09 MALNRAGSCNPAVVKIGITFLGLCLVGYLLGPPLYWHVLEGLAAVRRSSSAASCPPCNCDCDSQPLLSIPQALSNGSFTDCAKHDPEVTGETEKNFSELLSEELKLREAESLESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAELALLSQKQQTEMWELRARQKGWKESSNARLSVVVRKEGWGLMAMFVVVVIVNSSGQRHGGCGDYYDEKHGPTELS 229
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02596 229 Coils Coil 106 126 - -
Laca7g02596 229 PANTHER EXPRESSED PROTEIN 1 180 - -
Laca7g02596 229 Pfam Protein of unknown function (DUF1068) 12 178 IPR010471 -
Laca7g02596 229 Coils Coil 143 163 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02596 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:124711941 Laca8g02705 Laca-Chr8:96233764 dispersed
Laca Laca-Chr7:124711941 Laca5g02101 Laca-Chr5:141976125 transposed