AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02598 ATGGCAGAAACCCTAAGCCCTAGCCGTACACCAGGCCACAAACAGAGAGCTTCGGTCCTCTCCCCGGATCGACCTTTATTTTTGGGATCTAACGATGATAAGCTCGAACGTGCTCAAGCACGCGCCGCTCGTGCTGCAGCGATCCGCCGGAAGCCTGTCGCGATTAATCAAGCAAACGATGCTAATCCTGCCGACCCTTGTCTTGGCCAAGAGCAGATTATGGAGTTGTTTCAGAATTGCATCAAACTCGCCAGTGAAAATAAAATTAATCAGAAGAATACGTGGGAGCTGAATCTGATAGATCATCTTTGCGACATTATTAAGGTTGAAGAAGAGAACGACGTGGAGACCAATTTTCAGAAGGCTAGCTGCACCCTTGAAGCTGGAGTTAGAATATACTCAATGAGGGTGGATTCAGTTCATTCTGAGGCATATAAGGTTCTTGGAGGCATTAGTCGAGTTGCACTAGAAGCTGAACAAGATACTGTAGAAGATGGCAACACTGAAAACATGCCAGGAGAACGCACTTCAAAGAAAGAAAAGGAAATAAAGCTATCTCCTTTATCAACATTGGAATCATCCTTTGAGGCTCTTAATGTGAAGAAATTTGATGTTGCATTTGCTGTGGATCCTCTCTATCATCAAACAACTGCACAATTTGATGAAGGAGGATCAAAAGGTCTTTTACTAAATAACCTTGGAGTCTATGGTGGATGCCGAATGATATTTGATTCACTTGAAGTGCCTTCAAAATGCATGTTATCTTCAAATGAAAATAAAATAGATACAATTGATATCTCTTATACCAAAGATTGTATAGAGCAAATGGCATCAAACTTTATAAAGAAACTTGAAATCTCACCAAGTTTGAAGGAAATAGTGAACATGTTTGATGAAGATAACAAAAGACCAGTGGATACGTTTTCTTCTTCCCAAAACTCCATAGAACCAGATCATGAAGCTTTTGAAGGCGACTTCAATGGTGGTGAAACTGAAAACGATAATTCAGGGACATGGGACTTTATCAATGACAACCAAACAAGTTTAAATGATGATGACACTTATGATGGAGATGATGGACACTTTGAACAACCTGATCATCTTCAGGAAAACGAGGCATATGTTACTACTCATGATGATGAAAAATCCTCAACAGTTGACAGTTTCTTGTTTCTAAGCCTTGGATTAACTGGAAAACATAATGCATGGGCTGGACCTGAACATTGGAAGTATCGCAAAACTAAAGGTCCAGAAGAGGCTGTGAAGGAAAATGGATCACCATTAATGGCGAAAAGTAAAAGAAACAAGAAACAAGAACCTGATATAGATTTCACAAAAGCATTGGAATTAGAAAATGATTTGGATAATATCTTTGCTCCTCCTAAAAACCCTAAGACATTACTTCTTCCTATAAATAGAGAACCTATCAGCACAAAGCTTCCGGAAGATTGCCATTATCAACCAGAGGATCTTGTCAAGCTTTTTCTTCTTCCAAATGTTATGTGCCTTGGAAAGAGAGGAAGGAGATATTCGGATGAAGAAGGAGAAGGCAATAATAATAATAATAATGAAACATTTGCATCATGGGATAATGATTGTGGCCAATTTGATGATGGAAATGTTTATAATAGTGATATTGAAGATTCCACTACACTTGTCTCTCAGCCACGCCAGGTGAACAAGATTGAAGTGGAGTATGATAGAACATCAAAACAAGTTGATGTTCAAGCACTCAAGGAAATACTTTGGTCATCTATTCAAGAAACACATGTTTTGCCTCAAAAGGAGACGAAGGAGTTGTCTTTCAAGGAAATGTTGGCGGCTTTTCCAACGGATGTGGAAAAACAAGCGGCTGCATCGATCGATGCGATCTCACCACATTTGTGTTTTATATGTTTGTTGCATTTGGCTAATGAGCATGGATTGAGCATCCATGGATGTGATCTTTTGGATGATCTCACCATACATGTTCCCGCCATGTAG 1983 39.54 MAETLSPSRTPGHKQRASVLSPDRPLFLGSNDDKLERAQARAARAAAIRRKPVAINQANDANPADPCLGQEQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVALEAEQDTVEDGNTENMPGERTSKKEKEIKLSPLSTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMIFDSLEVPSKCMLSSNENKIDTIDISYTKDCIEQMASNFIKKLEISPSLKEIVNMFDEDNKRPVDTFSSSQNSIEPDHEAFEGDFNGGETENDNSGTWDFINDNQTSLNDDDTYDGDDGHFEQPDHLQENEAYVTTHDDEKSSTVDSFLFLSLGLTGKHNAWAGPEHWKYRKTKGPEEAVKENGSPLMAKSKRNKKQEPDIDFTKALELENDLDNIFAPPKNPKTLLLPINREPISTKLPEDCHYQPEDLVKLFLLPNVMCLGKRGRRYSDEEGEGNNNNNNETFASWDNDCGQFDDGNVYNSDIEDSTTLVSQPRQVNKIEVEYDRTSKQVDVQALKEILWSSIQETHVLPQKETKELSFKEMLAAFPTDVEKQAAASIDAISPHLCFICLLHLANEHGLSIHGCDLLDDLTIHVPAM 660
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02598 660 MobiDBLite consensus disorder prediction 1 26 - -
Laca7g02598 660 PIRSF Condensin-H 535 659 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Laca7g02598 660 PIRSF Condensin-H 4 549 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Laca7g02598 660 MobiDBLite consensus disorder prediction 1 15 - -
Laca7g02598 660 PANTHER CONDENSIN COMPLEX SUBUNIT 2 15 657 IPR022816 GO:0000796(InterPro)|GO:0000799(PANTHER)|GO:0003682(PANTHER)|GO:0007076(InterPro)|GO:0007076(PANTHER)
Laca7g02598 660 MobiDBLite consensus disorder prediction 329 350 - -
Laca7g02598 660 MobiDBLite consensus disorder prediction 161 180 - -
Laca7g02598 660 MobiDBLite consensus disorder prediction 305 365 - -
Laca7g02598 660 MobiDBLite consensus disorder prediction 420 439 - -
Laca7g02598 660 Pfam Condensin complex subunit 2 535 656 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Laca7g02598 660 Pfam Condensin complex subunit 2 24 526 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02598 K06676 condensin complex subunit 2