Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02598 | ATGGCAGAAACCCTAAGCCCTAGCCGTACACCAGGCCACAAACAGAGAGCTTCGGTCCTCTCCCCGGATCGACCTTTATTTTTGGGATCTAACGATGATAAGCTCGAACGTGCTCAAGCACGCGCCGCTCGTGCTGCAGCGATCCGCCGGAAGCCTGTCGCGATTAATCAAGCAAACGATGCTAATCCTGCCGACCCTTGTCTTGGCCAAGAGCAGATTATGGAGTTGTTTCAGAATTGCATCAAACTCGCCAGTGAAAATAAAATTAATCAGAAGAATACGTGGGAGCTGAATCTGATAGATCATCTTTGCGACATTATTAAGGTTGAAGAAGAGAACGACGTGGAGACCAATTTTCAGAAGGCTAGCTGCACCCTTGAAGCTGGAGTTAGAATATACTCAATGAGGGTGGATTCAGTTCATTCTGAGGCATATAAGGTTCTTGGAGGCATTAGTCGAGTTGCACTAGAAGCTGAACAAGATACTGTAGAAGATGGCAACACTGAAAACATGCCAGGAGAACGCACTTCAAAGAAAGAAAAGGAAATAAAGCTATCTCCTTTATCAACATTGGAATCATCCTTTGAGGCTCTTAATGTGAAGAAATTTGATGTTGCATTTGCTGTGGATCCTCTCTATCATCAAACAACTGCACAATTTGATGAAGGAGGATCAAAAGGTCTTTTACTAAATAACCTTGGAGTCTATGGTGGATGCCGAATGATATTTGATTCACTTGAAGTGCCTTCAAAATGCATGTTATCTTCAAATGAAAATAAAATAGATACAATTGATATCTCTTATACCAAAGATTGTATAGAGCAAATGGCATCAAACTTTATAAAGAAACTTGAAATCTCACCAAGTTTGAAGGAAATAGTGAACATGTTTGATGAAGATAACAAAAGACCAGTGGATACGTTTTCTTCTTCCCAAAACTCCATAGAACCAGATCATGAAGCTTTTGAAGGCGACTTCAATGGTGGTGAAACTGAAAACGATAATTCAGGGACATGGGACTTTATCAATGACAACCAAACAAGTTTAAATGATGATGACACTTATGATGGAGATGATGGACACTTTGAACAACCTGATCATCTTCAGGAAAACGAGGCATATGTTACTACTCATGATGATGAAAAATCCTCAACAGTTGACAGTTTCTTGTTTCTAAGCCTTGGATTAACTGGAAAACATAATGCATGGGCTGGACCTGAACATTGGAAGTATCGCAAAACTAAAGGTCCAGAAGAGGCTGTGAAGGAAAATGGATCACCATTAATGGCGAAAAGTAAAAGAAACAAGAAACAAGAACCTGATATAGATTTCACAAAAGCATTGGAATTAGAAAATGATTTGGATAATATCTTTGCTCCTCCTAAAAACCCTAAGACATTACTTCTTCCTATAAATAGAGAACCTATCAGCACAAAGCTTCCGGAAGATTGCCATTATCAACCAGAGGATCTTGTCAAGCTTTTTCTTCTTCCAAATGTTATGTGCCTTGGAAAGAGAGGAAGGAGATATTCGGATGAAGAAGGAGAAGGCAATAATAATAATAATAATGAAACATTTGCATCATGGGATAATGATTGTGGCCAATTTGATGATGGAAATGTTTATAATAGTGATATTGAAGATTCCACTACACTTGTCTCTCAGCCACGCCAGGTGAACAAGATTGAAGTGGAGTATGATAGAACATCAAAACAAGTTGATGTTCAAGCACTCAAGGAAATACTTTGGTCATCTATTCAAGAAACACATGTTTTGCCTCAAAAGGAGACGAAGGAGTTGTCTTTCAAGGAAATGTTGGCGGCTTTTCCAACGGATGTGGAAAAACAAGCGGCTGCATCGATCGATGCGATCTCACCACATTTGTGTTTTATATGTTTGTTGCATTTGGCTAATGAGCATGGATTGAGCATCCATGGATGTGATCTTTTGGATGATCTCACCATACATGTTCCCGCCATGTAG | 1983 | 39.54 | MAETLSPSRTPGHKQRASVLSPDRPLFLGSNDDKLERAQARAARAAAIRRKPVAINQANDANPADPCLGQEQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVALEAEQDTVEDGNTENMPGERTSKKEKEIKLSPLSTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMIFDSLEVPSKCMLSSNENKIDTIDISYTKDCIEQMASNFIKKLEISPSLKEIVNMFDEDNKRPVDTFSSSQNSIEPDHEAFEGDFNGGETENDNSGTWDFINDNQTSLNDDDTYDGDDGHFEQPDHLQENEAYVTTHDDEKSSTVDSFLFLSLGLTGKHNAWAGPEHWKYRKTKGPEEAVKENGSPLMAKSKRNKKQEPDIDFTKALELENDLDNIFAPPKNPKTLLLPINREPISTKLPEDCHYQPEDLVKLFLLPNVMCLGKRGRRYSDEEGEGNNNNNNETFASWDNDCGQFDDGNVYNSDIEDSTTLVSQPRQVNKIEVEYDRTSKQVDVQALKEILWSSIQETHVLPQKETKELSFKEMLAAFPTDVEKQAAASIDAISPHLCFICLLHLANEHGLSIHGCDLLDDLTIHVPAM | 660 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02598 | 660 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Laca7g02598 | 660 | PIRSF | Condensin-H | 535 | 659 | IPR022816 | GO:0000796(InterPro)|GO:0007076(InterPro) | |
| Laca7g02598 | 660 | PIRSF | Condensin-H | 4 | 549 | IPR022816 | GO:0000796(InterPro)|GO:0007076(InterPro) | |
| Laca7g02598 | 660 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Laca7g02598 | 660 | PANTHER | CONDENSIN COMPLEX SUBUNIT 2 | 15 | 657 | IPR022816 | GO:0000796(InterPro)|GO:0000799(PANTHER)|GO:0003682(PANTHER)|GO:0007076(InterPro)|GO:0007076(PANTHER) | |
| Laca7g02598 | 660 | MobiDBLite | consensus disorder prediction | 329 | 350 | - | - | |
| Laca7g02598 | 660 | MobiDBLite | consensus disorder prediction | 161 | 180 | - | - | |
| Laca7g02598 | 660 | MobiDBLite | consensus disorder prediction | 305 | 365 | - | - | |
| Laca7g02598 | 660 | MobiDBLite | consensus disorder prediction | 420 | 439 | - | - | |
| Laca7g02598 | 660 | Pfam | Condensin complex subunit 2 | 535 | 656 | IPR022816 | GO:0000796(InterPro)|GO:0007076(InterPro) | |
| Laca7g02598 | 660 | Pfam | Condensin complex subunit 2 | 24 | 526 | IPR022816 | GO:0000796(InterPro)|GO:0007076(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02598 | K06676 | condensin complex subunit 2 |