Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02600 | ATGACGGCAAAGAAGAGATTTGCTGCCGTTGCTTCGAGACGCCAGATTCCGCCGTTTGTTTCCAAGTTTGTGATCTCATTGTTGGTACTGTTTTGCTTCGTCGTCTTTTTCGGACTCTTCTCGCAATTCAAGCTTCAGTCGTCGTCTGTATCTACTGAATTCGGTTTTGATGAGTTTCGCCTCGAAGATTATCGTATGAAGATTGCTTTCCTTTTCCTTGTTCGAGATAATCTTCCTCTTGATTTCCTATGGCACAACTTCTTTAAGAATGCAGATCCTGAAAATTTCACCATTTACATACACTCTAAGCCTGGTTTTGTATTCGATGAATCTGTTACAAGATCAGCCTTCTTCTACAATCGACAGTTGAAAAACAGTGTTGAGGTGGGTTGGGGTAAACCAACCATGATTGAAGCAGAGAAGCTATTATTCAAAGCAGCCCTTGAAGATACTAATAATCAGATATTCATACTCCTCTCTGACAGTTGTGTCCCACTATATAATTTCAGTTATATATACAGATATATAATGTCATCTCCAAGAAGCTTTGTGGACAGCTTTATTGATGATGCCACAGAAAAACGTTATAATCCAGAAATGTCCCCTGACATACCTGAAGACAAATGGCGGAAAGGATCCCAGTGGATTACATTGGTTAGAAGACACGCAGAGGTTGTTGCTTATGATCATGTTGTTTTCCCCATCTTTAACAAACACTGCAAGAGGCGACCACTTTTAGACTTGAGCAAAGGAAACGAGTCTCTTAAAGAGCAACAGCAACACAATTGCATCCCAGATGAACATTATGTTCCCACCTTACTTGAGATGCGGGGGATTGAAGGTGAATTGTTGAGAAGAACATTAACATATTCTTTATGGAACCAATCAACAGAAACAATGAATACATTAGCTTGGCACCCTGTAACATTTGGTTACACAAGTGCTAGCCAAAAAAATATCCAAGCTATCAAGGATATTGACCGTGTTTATTTCAAGTCTGAGAACCGGACGGAATGGTGTGGCGGTCCTTGTTACTTATTTGCAAGGAAGTTTTCACGTGGGGCCGCCATGCGTGTTTTGACAAATGGGTTGGTGGGCCCGTATGACCCCAAAACGGTGTTCCTGGACCCCACATAG | 1137 | 41.42 | MTAKKRFAAVASRRQIPPFVSKFVISLLVLFCFVVFFGLFSQFKLQSSSVSTEFGFDEFRLEDYRMKIAFLFLVRDNLPLDFLWHNFFKNADPENFTIYIHSKPGFVFDESVTRSAFFYNRQLKNSVEVGWGKPTMIEAEKLLFKAALEDTNNQIFILLSDSCVPLYNFSYIYRYIMSSPRSFVDSFIDDATEKRYNPEMSPDIPEDKWRKGSQWITLVRRHAEVVAYDHVVFPIFNKHCKRRPLLDLSKGNESLKEQQQHNCIPDEHYVPTLLEMRGIEGELLRRTLTYSLWNQSTETMNTLAWHPVTFGYTSASQKNIQAIKDIDRVYFKSENRTEWCGGPCYLFARKFSRGAAMRVLTNGLVGPYDPKTVFLDPT | 378 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02600 | 378 | PANTHER | CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED | 36 | 360 | IPR044174 | GO:0016757(InterPro) | |
| Laca7g02600 | 378 | Pfam | Core-2-I-Branching enzyme | 68 | 323 | IPR003406 | GO:0016020(InterPro)|GO:0016757(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02600 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr1:60194622 | Laca7g02600 | Laca-Chr7:124780833 | dispersed | |
| Laca | Laca-Chr3:111222063 | Laca7g02600 | Laca-Chr7:124780833 | dispersed | |
| Laca | Laca-Chr7:11294099 | Laca7g02600 | Laca-Chr7:124780833 | dispersed | |
| Laca | Laca-Chr7:124780833 | Laca9g00969 | Laca-Chr9:22935889 | dispersed | |
| Laca | Laca-Chr7:124780833 | Laca1g01092 | Laca-Chr1:28227033 | transposed |