AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02601 ATGGACCTAGTAACAGAAGGACAAAGATTCCACCAATCAAACTACATGAACTCTGCGTTGTCATACTTGCGTTGTTTGACCAGTGCACCACCGTCAACGTCGCCGTCCGGCCGCCTCCACGGAATTCTGATCACCATAGCCGACGCGGCGTACCGCGCTAGCAAGGCGACGGAGACGGCAGCGACACCTTCACCTTCAGCTCAGGCCCTCTCCTACAGTGTGCCACTGTTGTCAGCCTTCCTTGCCTTTGCTATTGCCCAATTCCTCAAGGTCATCACCACCTGGTATAAAGAAAGAAGATGGGATCCTAAAAAGATTGTTGGCTCAGGTGGAATGCCATCATCTCATTCTTCAACTGTGGTGGCACTTGCAGTATCCATAGGTCTACATGAAGGAATTGAATCATCAACATTTGCCATTGCTGTTGTCTTAGCTTTTATTGTTATGTATGATGCATCTGGAGTCAGACTCCATGCTGGACGCCAAGCTGAAGTTTTAAACCAAATTGTGTGTGAATTTCCTCCTGAACACCCTTTATCCACATCCAGACCTCTTCGTGATTCTCTTGGACATACTCCATTACAGGTGATTGCAGGGGGGGTGTTAGGAGTTATGGTGGCATTCGTGATGAAAGCATCTGATTAA 645 47.91 MDLVTEGQRFHQSNYMNSALSYLRCLTSAPPSTSPSGRLHGILITIADAAYRASKATETAATPSPSAQALSYSVPLLSAFLAFAIAQFLKVITTWYKERRWDPKKIVGSGGMPSSHSSTVVALAVSIGLHEGIESSTFAIAVVLAFIVMYDASGVRLHAGRQAEVLNQIVCEFPPEHPLSTSRPLRDSLGHTPLQVIAGGVLGVMVAFVMKASD 214
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02601 214 CDD PAP2-like 76 209 - -
Laca7g02601 214 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 51 212 IPR003832 -
Laca7g02601 214 Pfam Divergent PAP2 family 75 206 IPR003832 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02601 K09775 uncharacterized protein
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr4:3461374 Laca7g02601 Laca-Chr7:124784227 dispersed
Laca Laca-Chr5:3723373 Laca7g02601 Laca-Chr7:124784227 dispersed
Laca Laca-Chr7:124784227 Laca9g02482 Laca-Chr9:83890290 dispersed
Laca Laca-Chr7:124784227 Laca3g00907 Laca-Chr3:26107308 transposed