AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02634 ATGGCTGGAAGATCTAGCTTCAAGACCTGCACATCTATGGCAGTTGATGGTTACCAAGTCAAGGATGTCCCCTTTTGCAAACACAAGGGGCAGAAAGGGAAAGAAAAAGACCAAAGAGTTCATCAACCAGAAGTTGATGCTGCAGCTTTATCAAAAAAGAGAGCTTTATTACCTGTAAAGAAACTCAGAAGCTCCCTTCTTGCAAATAGCAAATTACACAGAACTTTATACGGATTCATTGTCTTTCAAGTTTCATGGAAAGATGTTCGTGGTATCAATTACTTAAATGAACTTCAGACTGATACATCTCTTGCTATAGAGGCTAAATACATGAAAAGATGGGAATTCGATAGCATAGCTCAATCAGTTAAATGCATAAATTCATGGTTTCCAGGAACACCTAATGAAAAATCAATCTTGGAAGAGCATCTCAACTCTATGCTAGGAGATGAGTTTTATGACGCCCCAAAAGAATTCCAAGAATACCCTTGTACAAAAGATGATGAAAAAACCTTACAAGGGGAAAATCTTGATAAAAAGGTAGAAACTTTAGAAAATGAAACAAGTGAAGAAATCCACACCCCTCCACCTTATAAGAGAAGAAAACTAACAAATTCAGCAGGAATCGATATCGAGCTGAACCCAAAGCTGGACTTCCATCATGGTTGTCATTGCCCTTGTGTGGTTGTTGATGATGACGAGGACTGTGAGATCGTTTGTTTCGATTGTTACACAACCGTTATCTGTTCGTGGGATTTGGTGGAAAATCTAATTGAAGCTGTTATGCTTCCTGTGTGGTTCTTATCTTCGGTTGTTTGGACAATTGTAATGAGTATTATGTACCCAATATTTTGGTTCATTTGGGGGATACTTTATGCACCAATAAGTCTCATTCTTGGTGTATCAAATTTTGTGGGATTTATGTACAACCAAATATACGATTTATTTAGAGAAATATGGATTCTCGTGAGTGATATATTTAAATTAGCTTCAAATGCTGAGTCAGCAGTCCACACTTACGAGGTTTCCATTTGGAGATCCCTTTGGAACGACTTATTTTCCCAGGTTTTCCGAGCTGTTCGGAGTATTTTAAACGGGTTTGTTGCGTTCTTTGCAGCTTGCAATAGACATCGATTGAGTATATATAATCATTTACATGAGTTGATTCGAAGAGTTAATCAGCCAAGTGAGAGATTAGAGGGTGTGAATGTGAACTCTAGCCATGAATCACAAGGAACTCGGTTACTTGGGGGAGAAAAACAGGATAGGAGAAAGTGGAAGAAGAGTTAG 1290 38.22 MAGRSSFKTCTSMAVDGYQVKDVPFCKHKGQKGKEKDQRVHQPEVDAAALSKKRALLPVKKLRSSLLANSKLHRTLYGFIVFQVSWKDVRGINYLNELQTDTSLAIEAKYMKRWEFDSIAQSVKCINSWFPGTPNEKSILEEHLNSMLGDEFYDAPKEFQEYPCTKDDEKTLQGENLDKKVETLENETSEEIHTPPPYKRRKLTNSAGIDIELNPKLDFHHGCHCPCVVVDDDEDCEIVCFDCYTTVICSWDLVENLIEAVMLPVWFLSSVVWTIVMSIMYPIFWFIWGILYAPISLILGVSNFVGFMYNQIYDLFREIWILVSDIFKLASNAESAVHTYEVSIWRSLWNDLFSQVFRAVRSILNGFVAFFAACNRHRLSIYNHLHELIRRVNQPSERLEGVNVNSSHESQGTRLLGGEKQDRRKWKKS 429
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02634 429 PANTHER OS05G0597400 PROTEIN 246 425 - -
Laca7g02634 429 MobiDBLite consensus disorder prediction 400 414 - -
Laca7g02634 429 MobiDBLite consensus disorder prediction 400 429 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02634 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
115846 Laca5g02992 Laca7g02634
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:126328177 Laca9g03408 Laca-Chr9:140836576 dispersed
Laca Laca-Chr7:126328177 Laca5g02992 Laca-Chr5:188049799 transposed