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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02642 ATGAGGAAGCTCTACAACCACAATAAAGGCAAAATCCACCCATCACCACCGCCGTCCGCCACCGCCGATCACTTATCCTTGCTACCGATCGCCATAGCCACTCTCGCCGCCGCCCTTGCACCAGAAGACAAAGAAGTATTGGCATACCTTCTCTCCTGCTCTGTAACCACCACCACCACCACCACCAACAACAACAACACAAACAATAACTTCTCCGGCAACAGAAAACCCACCAATAAAACTCACGGCGGAGATGGTGGCGGAGGCGGAGGCGGAGGCGGAAGCCATATTCCGCAATTCAACTGCGACTGTTTTACATGCTACACAAGTTACTGGGTTCGATGGGATGCGTCGCCAAATCGACAACTGATTCATGAAATCATTGATGCTTACGAAGATGGGTTGATTCATAACAAGAAGAGTGGGAAGAACAAGAAAGAAAGAAGAAAGAACAAAGTTTCTTCATCTTCCCCCAACGCGCCGATTACCGCTTCGGAGAAGGTTCCTCACGCGCCGCCGCATGTCGAGGAAAAATTGATTAACAGTGATTATGATGATGATGGAGATGAAGAGGAATTGATGATTGGGTCATCATCGGAGAAAGGATCAGTGAGAAAATTTGTAAGTTTCTTAGGAGATAGGATTTGGGGTGTTTGGGGCATTTGA 666 47.9 MRKLYNHNKGKIHPSPPPSATADHLSLLPIAIATLAAALAPEDKEVLAYLLSCSVTTTTTTTNNNNTNNNFSGNRKPTNKTHGGDGGGGGGGGGSHIPQFNCDCFTCYTSYWVRWDASPNRQLIHEIIDAYEDGLIHNKKSGKNKKERRKNKVSSSSPNAPITASEKVPHAPPHVEEKLINSDYDDDGDEEELMIGSSSEKGSVRKFVSFLGDRIWGVWGI 221
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02642 221 MobiDBLite consensus disorder prediction 59 90 - -
Laca7g02642 221 MobiDBLite consensus disorder prediction 139 175 - -
Laca7g02642 221 MobiDBLite consensus disorder prediction 1 20 - -
Laca7g02642 221 MobiDBLite consensus disorder prediction 59 79 - -
Laca7g02642 221 PANTHER F12F1.11-RELATED 1 220 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02642 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
115852 Laca5g03009 Laca7g02642
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:10416131 Laca7g02642 Laca-Chr7:126553502 dispersed
Laca Laca-Chr5:188469422 Laca7g02642 Laca-Chr7:126553502 wgd