Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02677 | ATGTTTCACATCAATACAGTTCCCCAAAAGACGTCGCTAACCCCTACTGTTAATCACAGTGATCGCGATCTAATGGCGCAGCCTCTTCGTCCTTCCGGCGAGATTCACGTAATCGTCGGGCCTATGTTCGCCGGTAAAACCACCGCTCTTCTTCGCCGGATCAAATCCGAAGGCACTAACGGCAGGAATATAGCGATGATAAAGTCGAGCAAGGATACCCGATACGCCATTAATTCAGTTGTAACACACGACGGGACGAAATACCCATGTTGGGCACTTCCTGATCTGTTGTCTTTCAAACAAAAATTTGGAGAAGAAGCTTATGAAAAGCTGGATGTTATCGGAATTGATGAAGCACAGTTCTTTGATGATCTATATGAATTTTGTTGCACAGCTGCTGATACTGATGGAAAAACTGTCATAGTTGCAGGTCTTGATGGTGATTACTTAAGAAGGAACTTTGGTCCAGTTCTTGATATTGTCCCACTTGCTGACACCATAACCAAATTAACAGCTCGATGTGAAGTATGTGGGAAAAAAGCTCATTTCACTTTCAGGAAGACGAAGGAGACACGAACAGAACTTATAGGTGGGGCAGATATGTATATGCCTGTTTGTCGTCAACATTATGTTAATGGGCAAATGGTGATCAAACACTAA | 660 | 43.18 | MFHINTVPQKTSLTPTVNHSDRDLMAQPLRPSGEIHVIVGPMFAGKTTALLRRIKSEGTNGRNIAMIKSSKDTRYAINSVVTHDGTKYPCWALPDLLSFKQKFGEEAYEKLDVIGIDEAQFFDDLYEFCCTAADTDGKTVIVAGLDGDYLRRNFGPVLDIVPLADTITKLTARCEVCGKKAHFTFRKTKETRTELIGGADMYMPVCRQHYVNGQMVIKH | 219 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02677 | 219 | Gene3D | - | 28 | 170 | IPR027417 | - | |
| Laca7g02677 | 219 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 33 | 171 | IPR027417 | - | |
| Laca7g02677 | 219 | Gene3D | - | 171 | 212 | - | - | |
| Laca7g02677 | 219 | FunFam | Thymidine kinase | 171 | 213 | - | - | |
| Laca7g02677 | 219 | FunFam | Thymidine kinase | 29 | 170 | - | - | |
| Laca7g02677 | 219 | ProSitePatterns | Thymidine kinase cellular-type signature. | 197 | 210 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Laca7g02677 | 219 | Pfam | Thymidine kinase | 33 | 210 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Laca7g02677 | 219 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 171 | 213 | - | - | |
| Laca7g02677 | 219 | PIRSF | Tdk | 30 | 219 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Laca7g02677 | 219 | PANTHER | THYMIDINE KINASE | 26 | 218 | IPR001267 | GO:0004797(InterPro)|GO:0004797(PANTHER)|GO:0005524(InterPro)|GO:0046104(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02677 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr1:156466634 | Laca7g02677 | Laca-Chr7:128639044 | dispersed |