Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02698 | ATGCGTTTGCCTCCTTCTGCTACTTCTGCACCATTTCTTCAATCTTTTCTCATGGATTCATCTTTCCAAATCCAGAATTCGTCTTTCCAAATCGAACCCAGAAAGAAAAGGTCAAAACTTTTAGATGAAGATGATGACAGAATCCATGGCGAGGGTTTCGGATTGGAGAATTTACCCAGGGATGTACTCCTCGACATACTCGCCAAGCTGCCGATTTCATCCCTGATTCAGTTCCGGTTTGTTTGCCGTTCATGGAAACTGCTGTCAGTCGACCCTGAACTTTCCCGGCTTCACCACGCTGCGGTGGCGGAAAACGACCCGACGCTGCTGTTCCACTGCGATTACCCTATCCGTAACCAACTCTCTTTCGTCGAGTTATCCTCCGGTGGCGGCGGCGACGAAGATGAAGATGATGAAGACGACGACGACAAAATCGTAAGAAAGATTTCCACACCTTTTTGTAGCTCCATGCCTGAATTCAACGTCGTGGGTTCATGTAATGGCTTGTTGTGCTTGTCCGATTCGCTTTATGGTGAACCCGTTTACGTTTTCAACCCGTTTTCCCGGGATTATCTGGAGCTACCGAAATCCAAGCAGTTTCAGGAACAGGAGGTGATGTTCGGATTCGGATTTCACCCAATTACAAACGAGTACAAGGTTGTGAAGATTGTGTACTACAGAAACCGGCAGGGGAATCGTCGGGTCAGCCGAAACAACAGGAATTACCCGAAATCGGAGGTTCAAATTCTCACAATTTCCAAAGAAACAAACAAGAATACATGGAGATCGCTCGGGAAAGTGCCTTACCAGCTTGACAGACAAGCGGCGGAAGTTCCTGTAGTGAACGGGAGAATCCATTGGCTGAGCCGACCTGGTAGAGTCGCCGGAGTTTTAGGTCGAGCGATCATCTCTTTTGACCTAAAAGACGAACAGTTCAAAGTAGTGACGAAACCTAACCATGTTACAGTCATCCGGAGCAACTTTCACTTGGCCGTCATACGAGGGTGTCTAGCGGCGGTGATTTCATGTGGGTATGGGAAATTGGAGATCTGGGTCATGAAGGAATACGATTCCCAGGAATCTTGGATGAAGGAATTCGTCATCCATGGAGTTTATCCTGCAAGGGTCCCGAATCATGAGAACCATTACCAGATAGGGAGACCTGGTTTATCACGGAGGATGGTTAGGGTTTTATGCGTTTTGAAGAACGGAGAGATCTTACTGGAATACAGAGGAGGAAGCTTGGTGAAATACGATCCTAAATGGAAAGAGTTTAAAGACGTCGTCTTCTCCAAAATGCCCAAATTGTTTCAGACAATTGTTCATCTGGGTACCCTCAATTGGATCCATACCTCAATGTAA | 1362 | 46.7 | MRLPPSATSAPFLQSFLMDSSFQIQNSSFQIEPRKKRSKLLDEDDDRIHGEGFGLENLPRDVLLDILAKLPISSLIQFRFVCRSWKLLSVDPELSRLHHAAVAENDPTLLFHCDYPIRNQLSFVELSSGGGGDEDEDDEDDDDKIVRKISTPFCSSMPEFNVVGSCNGLLCLSDSLYGEPVYVFNPFSRDYLELPKSKQFQEQEVMFGFGFHPITNEYKVVKIVYYRNRQGNRRVSRNNRNYPKSEVQILTISKETNKNTWRSLGKVPYQLDRQAAEVPVVNGRIHWLSRPGRVAGVLGRAIISFDLKDEQFKVVTKPNHVTVIRSNFHLAVIRGCLAAVISCGYGKLEIWVMKEYDSQESWMKEFVIHGVYPARVPNHENHYQIGRPGLSRRMVRVLCVLKNGEILLEYRGGSLVKYDPKWKEFKDVVFSKMPKLFQTIVHLGTLNWIHTSM | 453 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02698 | 453 | ProSiteProfiles | F-box domain profile. | 52 | 97 | IPR001810 | GO:0005515(InterPro) | |
| Laca7g02698 | 453 | SMART | fbox-2 | 58 | 98 | IPR001810 | GO:0005515(InterPro) | |
| Laca7g02698 | 453 | PANTHER | OS02G0783600 PROTEIN | 58 | 368 | IPR052361 | - | |
| Laca7g02698 | 453 | Gene3D | - | 49 | 97 | - | - | |
| Laca7g02698 | 453 | Pfam | F-box domain | 55 | 94 | IPR001810 | GO:0005515(InterPro) | |
| Laca7g02698 | 453 | NCBIfam | F-box protein interaction domain | 164 | 370 | IPR017451 | - | |
| Laca7g02698 | 453 | SUPERFAMILY | F-box domain | 51 | 113 | IPR036047 | GO:0005515(InterPro) | |
| Laca7g02698 | 453 | Pfam | F-box associated | 281 | 367 | IPR006527 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02698 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 115859 | Laca5g03034 | Laca7g02698 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:129207479 | Laca8g04057 | Laca-Chr8:183304064 | dispersed | |
| Laca | Laca-Chr5:189521045 | Laca7g02698 | Laca-Chr7:129207479 | wgd |