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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Laca7g02702	ATGCTTCCTAACTTTGAACCCCAAGACCACGGAATGGTGGGACTATCTATGGGAGAGAAGCATTTTATACAGGGAGGAATTGCTCAAGACCTTCGTACAGATGGGCGTAAAAGATTAACATATCGCCCCATATCTGTTGAAACTGGAGTCATTGCTCAAGCAAATGGTTCAGCAAGAGTAAAGATGGGTAAAACTGAAGTCATAGCTAGTGTGAAGGCTGAATTAGGAAGACCAAGTTCTTCAGCCCCTGACAAAGGAAAAGTTTCCATATACATCGATTGCAGTCCCACAGCAGCACCACAATACGAGGGAAGAGGAGGCGAAGAATTGTCAATGGAACTCTCTGCAGCCTTGCGACAATGTCTTTTAGGTGGTAAAACTGGAGCAGGAGCTGGAATTAATCTTTCATCTTTGTCAATAGTGGAAGGGAAAGTGTGTTGGGATTTATACATTGATGGTCTTGTGATAAATATAGATGGAAATATACTCGATGCCTTAGGTGCTGCTATCAAGGCTGCTTTAAGCAACACGGGTATTCCAAAAGTCAATGTTGCTTCAACTGCTCCTTCTGATGAACAACCAGAAGTTGATGTGAGTGATGAAGAGTTTCTACAATTTGACACAACTGCAGTTCCTGTCATAGTTACTTTAACTAAGGTTGGGAGGCATTATATAGTGGATGCGACTTCAGAGGAGGAATCAGAAATGAGTTCAGCAGTTTCGGTTTCGGTCAACAGACAAGGGCTGATTTGTGGGTTGACCAAAAGAGGTGGGGCCGGGTTGGATCCGAGTGTTGTACTTGATATGATATCGGTTGGTAAACATGTGAGTGAGGAGTTGATGAACAAATTGGATTCTGAAATTGCTGCAGCTGAAGCAACCATGGAAGAGGAGTGA	897	43.26	MLPNFEPQDHGMVGLSMGEKHFIQGGIAQDLRTDGRKRLTYRPISVETGVIAQANGSARVKMGKTEVIASVKAELGRPSSSAPDKGKVSIYIDCSPTAAPQYEGRGGEELSMELSAALRQCLLGGKTGAGAGINLSSLSIVEGKVCWDLYIDGLVINIDGNILDALGAAIKAALSNTGIPKVNVASTAPSDEQPEVDVSDEEFLQFDTTAVPVIVTLTKVGRHYIVDATSEEESEMSSAVSVSVNRQGLICGLTKRGGAGLDPSVVLDMISVGKHVSEELMNKLDSEIAAAEATMEEE	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Laca7g02702	298	PANTHER	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	12	292	IPR050590	GO:0000176(PANTHER)\|GO:0000177(PANTHER)\|GO:0000467(PANTHER)\|GO:0016075(PANTHER)\|GO:0017091(PANTHER)\|GO:0034427(PANTHER)\|GO:0034473(PANTHER)\|GO:0034475(PANTHER)\|GO:0034476(PANTHER)\|GO:0043928(PANTHER)\|GO:0071028(PANTHER)\|GO:0071035(PANTHER)\|GO:0071038(PANTHER)\|GO:0071042(PANTHER)
	Laca7g02702	298	SUPERFAMILY	Ribosomal protein S5 domain 2-like	15	234	IPR020568	-
	Laca7g02702	298	Gene3D	-	14	298	IPR027408	-
	Laca7g02702	298	Pfam	3' exoribonuclease family, domain 1	41	180	IPR001247	-
	Laca7g02702	298	Pfam	3' exoribonuclease family, domain 2	211	274	IPR015847	-
	Laca7g02702	298	CDD	RNase-PH-RRP42	15	286	-	-
	Laca7g02702	298	FunFam	Exosome complex component RRP42	14	297	-	-
	Laca7g02702	298	SUPERFAMILY	Ribonuclease PH domain 2-like	207	292	IPR036345	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Laca7g02702	K12589	exosome complex component RRP42

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Laca	Laca-Chr2:84711112	Laca7g02702	Laca-Chr7:129295706	dispersed
	Laca	Laca-Chr7:129295706	Laca9g02526	Laca-Chr9:88197383	dispersed