Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02713 | ATGAATCGATTCACTTTCAGAAAAATATACACACGTAGTAATCCTATTATCATTGGTGCTCGAAGGAAGATCTCAGAATCATCAATACATACAGCAAACAGCAACTCTATCTTTAGAAAACTTATTTCAGTCTTAAGGGATAAATCCATAAGTACATTCCAAACTAGATCTGCAACAAGCATGGTGGTAAACTTTGAAGATTCGTCAAAGGTTCAAAACAATGAAGTTGACCACATTCATATGCTAAATGCGACTTATGATAATTATGATGGAGTCATTGTGGACATTAAGGAGAATATGGATGAAGATATCTTTACCACTCTACTTCAAACATCAATATCCCAATGGAGGCAACAGGGTAAAAAGGGTGTTTGGCTTAAACTGTCTCTTGAACTTGTGAGTCTTGTTAAACCTGCAGTGAAGGAAGGATTTTGGTATCATCATGCTGAACCAACATACTTGATGCTCGTGTATTGGATTCCTGAAACTAATCATACTCTTCCATCTAATGCTTCTCATCGTGTTGGTGTTGCTGCTTTTGTGGTCAACTCTAAAGGGGAGATTCTTGTAGTGCAAGAGAAAAGCGGGGTGTTTAAAGGCACAGGGGTATGGAAATTACCAACTGGTAGTGTTGAGGAGGGTGAAGATATATGTACAGCTGCAAGCAGGGAAGTGAAAGAAGAAGCTGGAATTGATACAGAATTTGTGGAAGTTCTAGCATTCAGGCAAAGCCACATGTCATTTTTTAGCAAATCGGATCTAATGTTTGTGTGTATGCTAAAACCAACATCATTTGAGATCGAAAAGCAAGAGTCAGAGATTGAAGCAGCTAAGTGGATGCCTATTGAGGAATACGCGAATCAGCCATTTGTAAAGAATCGAAAATCATTTGAGTATGTTGCTAAGATATGCATAGAACGGAAAGATAACAAATATGTCGGCTTCAATGCAATTTCTACAGCAACTGCTACATCTCTCAAAAACAGCTATTTGTATTCGCATCATCAGGAGGAGTAG | 1017 | 38.15 | MNRFTFRKIYTRSNPIIIGARRKISESSIHTANSNSIFRKLISVLRDKSISTFQTRSATSMVVNFEDSSKVQNNEVDHIHMLNATYDNYDGVIVDIKENMDEDIFTTLLQTSISQWRQQGKKGVWLKLSLELVSLVKPAVKEGFWYHHAEPTYLMLVYWIPETNHTLPSNASHRVGVAAFVVNSKGEILVVQEKSGVFKGTGVWKLPTGSVEEGEDICTAASREVKEEAGIDTEFVEVLAFRQSHMSFFSKSDLMFVCMLKPTSFEIEKQESEIEAAKWMPIEEYANQPFVKNRKSFEYVAKICIERKDNKYVGFNAISTATATSLKNSYLYSHHQEE | 338 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02713 | 338 | CDD | Nudix-Hydrolase-12 | 173 | 304 | - | - | |
| Laca7g02713 | 338 | FunFam | Nudix hydrolase 8 | 174 | 312 | - | - | |
| Laca7g02713 | 338 | ProSiteProfiles | Nudix hydrolase domain profile. | 172 | 304 | IPR000086 | - | |
| Laca7g02713 | 338 | PANTHER | NUDIX HYDROLASE RELATED | 53 | 336 | IPR003293 | GO:0035529(PANTHER)|GO:0047631(PANTHER)|GO:0051287(PANTHER) | |
| Laca7g02713 | 338 | Pfam | NUDIX domain | 173 | 295 | IPR000086 | - | |
| Laca7g02713 | 338 | ProSitePatterns | Nudix box signature. | 209 | 230 | IPR020084 | GO:0016787(InterPro) | |
| Laca7g02713 | 338 | SUPERFAMILY | Nudix | 140 | 302 | IPR015797 | - | |
| Laca7g02713 | 338 | Gene3D | - | 79 | 164 | - | - | |
| Laca7g02713 | 338 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 132 | 150 | IPR003293 | - | |
| Laca7g02713 | 338 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 258 | 282 | IPR003293 | - | |
| Laca7g02713 | 338 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 170 | 188 | IPR003293 | - | |
| Laca7g02713 | 338 | Pfam | Nudix hydrolase domain | 82 | 160 | IPR040618 | - | |
| Laca7g02713 | 338 | FunFam | nudix hydrolase 2 | 79 | 165 | - | - | |
| Laca7g02713 | 338 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 174 | 312 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02713 | K26956 | ADP-ribose/NAD+ diphosphatase [EC:3.6.1.13 3.6.1.22] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr5:2409877 | Laca7g02713 | Laca-Chr7:129660725 | dispersed | |
| Laca | Laca-Chr7:9527557 | Laca7g02713 | Laca-Chr7:129660725 | dispersed | |
| Laca | Laca-Chr7:129652256 | Laca7g02713 | Laca-Chr7:129660725 | tandem |