Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02715 | ATGGCGGCAATACTGGCTTCTAATAGCTGCTATTGCCGTGATGTGCAATTGGTAAATCAAGGAAGAACAGCTGAAAATCTCAGCTTCTCAAGAGCTCTTTCTATCCGGAAATTGGATCGCCATGACTGTGCTTCACATAAAACTGAAAGGTTTCGCAAATTCCATGTTAAGATGCAGCAGACAGAATCGCCCATGAAATTTGGTACCAACGGTCGACCTGTAAAGTTGGTTACAAATGGTCAAACTGTGAAGTTGGGTGCCAATGGTAAACCAGTAAATTTGGACACCAATGGTAAGCCTGTAAAGTTGGGTTCCAATGGTAAACCAGTCACCATGGTTTCCACCAGTGAACTTGTAAACAACAAGACTCCATCCAAACAAACATCAGGATTAGTGAATGGATCACGATCAGCACCAATTGTTAATGGAACAAGTCTTGTTAAGAGAGAGACCACTCCAGCACTAGTTAAGTCAGTAAAAGTTAAAGAACCCACAGGATTTCCACCCTCTGAAGAATTAAAGGTGTTGCCATCAGATGAAAGTTTCAGCTGGGCAAATGAAAATTATAATTCGGTGCAAAGATCAATAGATGTTTGGTCTTTTGTTCTTTCTTTGCGTGTTCGTGTTCTATTGGACAATGCAAAATGGGCATATCCTGGAGGCTTCACAGAAGAAAAACAGAAAAACAGAAGAAGAAAAACAGCTTCATGGTTAAGAGAGAGTGTGCTTCAACTTGGCCCAACTTTTATAAAACTCGGGCAGTTATCTTCAACAAGATCAGATCTATTTCCACGTGAATTTGTCGATGAGCTTGCTAAATTACAGGACAGAGTACCAGCTTTCTCACCAGCAAAAGCGAAAGGTTTTATTGAAAAAGAATTGGGAGCTCCTGTTCATATAATCTTTAAGGAGTTTGAAGAAAGACCAATTGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCAATATTACATAATGGAGAGAAAGTGGTTGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTTTTTGACATAGATTTAAAGAATTTAAAGCTGGTGGCTGAGTATTTTCAAAGGAGTGAAAGTCTTGGTGGTCCAACAAGAGACTGGATAGGCATCTATGATGAATGTGCCAAGATCTTGTATGAGGAGATTGATTATATAAACGAAGGGAAAAATGCTGATAAATTTCGTAGGGATTTTCGTAATGTTAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCAACAAAGGTGCTAACTTTGGAGTATGTACCAGGAATTAAGATTAATAATTTGGATTTGATAAAAGAAAGGGGTTACAGTCGATCTCAAATCTCTTCACATGCCATTGAAGCATACTTGATTCAGATACTGAAAACTGGTTTCTTTCATGCTGATCCTCACCCTGGAAATCTTGCAATTGACTCAGATGAATCACTAATCTACTATGATTTTGGCATGATGGGGGAGATTAAATCCTTCACTAGAGAAAGATTGATGGATCTTTTTTATGCAGTTTATGAAAAAGATGCAAAAAAGGTTATGAACAGTTTGATAAGTCTTGAAGCACTTCAACCTACTGGAGACATGTCATCAGTGAGAAGATCTGTTCAGTTCTTTTTGGATAATTCTTTAAACCAGTCACCAGATCAGCAAACAACTTTGGCTGCAATAGGCGAGGAGTTATTTTCCATTGCCACAGATCAACCTTTCCGGTTCCCATCAAACTTCACATTTGTGATTAGGGCTTTTTCCACTCTTGAAGGAATCGGCTACTCACTGGATCCAGATTTTTCATTTGTCAAGATTGCTGCACCTTATGCACAGGAGCTATTAGATCTCAAACAACAGCGTAGTGGGACACAACTTGTACAAGAGATACGAAAACAAGCGGATGATGCAAGATCATACACCATGTCAATGCCTTATAGAGTTCAACGAATCGAAGAGTTTGTAAAACAACTAGAATCAGGAGACCTTAAACTTCGTGTCAGAGTTCTCGAGTCTGAGAGAGCAGCTAGGAAGGCAACAATATTGCAAATGGGAACCCTGTATACGGTTCTCGGGGGTACACTTGTAAATATTGGTCTCACAATGACCACTCAAGGCAACCAACTTATAGCAAATGGGTCATTTATTGCTGCTGGTGTTTTTCTAGCATTACTTATTAGGTCAATGCAAAGGGTGAAGAAGCTTGATAAATTTGAAAAGATGATTTAA | 2226 | 39.31 | MAAILASNSCYCRDVQLVNQGRTAENLSFSRALSIRKLDRHDCASHKTERFRKFHVKMQQTESPMKFGTNGRPVKLVTNGQTVKLGANGKPVNLDTNGKPVKLGSNGKPVTMVSTSELVNNKTPSKQTSGLVNGSRSAPIVNGTSLVKRETTPALVKSVKVKEPTGFPPSEELKVLPSDESFSWANENYNSVQRSIDVWSFVLSLRVRVLLDNAKWAYPGGFTEEKQKNRRRKTASWLRESVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPAKAKGFIEKELGAPVHIIFKEFEERPIAAASLGQVHRAILHNGEKVVVKVQRPGLKKLFDIDLKNLKLVAEYFQRSESLGGPTRDWIGIYDECAKILYEEIDYINEGKNADKFRRDFRNVKWVRVPQVFWDYTATKVLTLEYVPGIKINNLDLIKERGYSRSQISSHAIEAYLIQILKTGFFHADPHPGNLAIDSDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLISLEALQPTGDMSSVRRSVQFFLDNSLNQSPDQQTTLAAIGEELFSIATDQPFRFPSNFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKQQRSGTQLVQEIRKQADDARSYTMSMPYRVQRIEEFVKQLESGDLKLRVRVLESERAARKATILQMGTLYTVLGGTLVNIGLTMTTQGNQLIANGSFIAAGVFLALLIRSMQRVKKLDKFEKMI | 741 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02715 | 741 | CDD | ABC1-ADCK3-like | 273 | 520 | - | - | |
| Laca7g02715 | 741 | SUPERFAMILY | Protein kinase-like (PK-like) | 275 | 523 | IPR011009 | - | |
| Laca7g02715 | 741 | MobiDBLite | consensus disorder prediction | 87 | 109 | - | - | |
| Laca7g02715 | 741 | Pfam | ABC1 atypical kinase-like domain | 273 | 519 | IPR004147 | - | |
| Laca7g02715 | 741 | PANTHER | CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED | 107 | 674 | IPR050154 | GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02715 | K03688 | ubiquinone biosynthesis protein | ||||
| Laca7g02715 | K08869 | aarF domain-containing kinase |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr2:102814212 | Laca7g02715 | Laca-Chr7:129737793 | dispersed | |
| Laca | Laca-Chr7:129737793 | Laca8g00771 | Laca-Chr8:22567327 | dispersed | |
| Laca | Laca-Chr7:129737793 | Laca1g00858 | Laca-Chr1:22557776 | transposed | |
| Laca | Laca-Chr7:129737793 | Laca4g02219 | Laca-Chr4:91850684 | transposed |