AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02718 ATGACGATTTCCTGCGACGGAAAGGTAATCTACAACCTTGACTACCGATCGAAGAACGACGATGCGTGGTACACCTCCGGCGTCGTTCTCGAAAATGGAAAGCGGCTGCGCGTCAAGTTCGAGGATTTCAAGTCAGGCGACGCTGATGAGGTATTCTCTATGGGTAGTTTCTCCAAACACGATGAACTGGAAGAATTTCTCCGTAGATTTCGTCCGGTGTCCGTGCCGGTCGAGGAGAACGAGTGCTCCACAGTGATCGAAGGCATGACGGTGTGTGCTACTTATAAAGGCGATGGATCAGTTCGATACTTCGACGCCATTGTTGATGGTGTTTGCTACAAAGAGCATAAACCTGAGAAGTGCTTATGCACTTATCTACTATGCTGGAAACATGGCCCTGGTGAAGGCATCGTAACTGCAGAAAGTATTGTTGATATATGCTTCATTATGTCTGGTGCCCCTGATCACAGAGTTACTGACTTTGCAAAGCTTGTGAAGGAAAAACTCTCTTCTCAATCTAGTCTCACACCCAAGACTCCATTTCTGTCCAGAAAAACAAGCTCAAACCAAACTCTTAACAAGTTACAGGAATTCAGTGGTGATGGAGACAGTTGTTTTGGTGGATTCTCTGAAGAGAAGGGAAGATTCAAGATTGAACTAATTGATCAGGACAGAGACATGGGAGGTGTCAAAGAAACTGAATCTCATCATTTCATAATATTAGAGAATCTGGAGAAAGATCTATCTCCAGTCTTGATGAAAGACTTCATATATGAACAAACTTCAATCACAACACATACTTATGTTTTTCAAAGCCTGTCAACTGAACCATATGCAAGAGGAGTAATTATTGTGGATAGCAAACAAAAGCTGAAGAGGATACATGAATTTATAAGCAATCCAAATCAGTTTATTGTATCTACTTTTTCTGGAAGGCCATGGGTTATAGCTGAAGACATGCTTAGAGCTGAAACTTTCAACATAATGCAGATCCTGCAGCCAAAGTCTGAGAAGAAAAAAACAGGAGAGAAGTTAATGGTGACTTGTGAAGAGGTTAGATATGGAGGAGAAGAAGAAATGGCGTTCATCCAGTACAAACTAGTTACTAATTCAGGTGTAGTAAAAGGTGCAAGAGGTGAGTTGTAA 1146 41.88 MTISCDGKVIYNLDYRSKNDDAWYTSGVVLENGKRLRVKFEDFKSGDADEVFSMGSFSKHDELEEFLRRFRPVSVPVEENECSTVIEGMTVCATYKGDGSVRYFDAIVDGVCYKEHKPEKCLCTYLLCWKHGPGEGIVTAESIVDICFIMSGAPDHRVTDFAKLVKEKLSSQSSLTPKTPFLSRKTSSNQTLNKLQEFSGDGDSCFGGFSEEKGRFKIELIDQDRDMGGVKETESHHFIILENLEKDLSPVLMKDFIYEQTSITTHTYVFQSLSTEPYARGVIIVDSKQKLKRIHEFISNPNQFIVSTFSGRPWVIAEDMLRAETFNIMQILQPKSEKKKTGEKLMVTCEEVRYGGEEEMAFIQYKLVTNSGVVKGARGEL 381
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02718 381 Gene3D - 77 147 - -
Laca7g02718 381 Pfam SAWADEE domain 11 147 IPR032001 GO:0003682(InterPro)
Laca7g02718 381 PANTHER SAWADEE PROTEIN 10 349 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02718 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:129767199 Laca7g02719 Laca-Chr7:129815889 tandem