AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02719 ATGATTTTCGACGGCCTGGACTTCCGGTCGAAGAAAGATGATGCGTGGTACGCCTGTGGCGTCGTTCTTGACGGAAAGAAGCTCCGAGTGAAGTTCAAGGATTTTGTGGAGAGCTTCCATGACGAGGTTTTCTCCATCTCTGATTTCTCCACTCACCGTGAAATTGAACAATTTCTCCTTAGATTTCGTCCGACCTCCATGCCGATAGAGGAGAATGAGTGCTCCAAAGTGATAGAAGGCATGATGGTCTCTGCTACATATACACGCGATGGATTAGTTCGATTCTTTGATGCCATTGTTGATGCCGTGAATTACAAAGAGCACACACCTGGGAAGTGCCTATGCACTTACCTACTATTCTGGCAACATGGTCCTGCTGAAGGCAACATAACTGCAGCAAGTATCGATGATATATGCCTTATTATGTCTGGTGCCATTGATCCCAGAGTGACTGAATTCGCAAAGCTTGTGAGGGAAAAACTTAGAGGTGCCTCTTCTCAATCTAGTTTCACATCCAAGGCTCCATTTTTGTCTAAAAAAACAAGTTCAAACCAAACTCTCAACAAGTTACAGGAGTTCAGTGGTGATGGAGACAGTCGTAATGGTGGATCATCTGAAGGGAGGGAAAGATTCAAGATTCAACTAAATGATCAAGACAGAGATATGGGAGCACAAGCATATGTTTTTTTAAGCTTGTCAGCAGAAACATATGCTAGAGGAGCACTTGTTTTAAATAGCAAATCAAAGCTTAAGAGGATATATGAATTTATAAACAACCCAAATCACTTCATTGTATCTTCATCTGGAAGGCCATGGGTAATAGCTGAAGACATGCTTAGAAATGGAACTTTCAACATAAACCTTCAGAGCTTGCAGCTAAAGTGTAAGAACCAAAATACAGAGAGCAAGTTAATAATTGTACGATTAGGAACAGATGAATATACAAGAGCTAAACAACTGAAAGAGATATACATGGAATTTCGTGATCATGTAAATATACTTGTGGAGAAGTTAGATATGGAGGAGAAGAAGAACTTGAATCCATCCAGTGCAAATTAG 1059 40.79 MIFDGLDFRSKKDDAWYACGVVLDGKKLRVKFKDFVESFHDEVFSISDFSTHREIEQFLLRFRPTSMPIEENECSKVIEGMMVSATYTRDGLVRFFDAIVDAVNYKEHTPGKCLCTYLLFWQHGPAEGNITAASIDDICLIMSGAIDPRVTEFAKLVREKLRGASSQSSFTSKAPFLSKKTSSNQTLNKLQEFSGDGDSRNGGSSEGRERFKIQLNDQDRDMGAQAYVFLSLSAETYARGALVLNSKSKLKRIYEFINNPNHFIVSSSGRPWVIAEDMLRNGTFNINLQSLQLKCKNQNTESKLIIVRLGTDEYTRAKQLKEIYMEFRDHVNILVEKLDMEEKKNLNPSSAN 352
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02719 352 PANTHER SAWADEE PROTEIN 5 344 - -
Laca7g02719 352 Gene3D - 69 139 - -
Laca7g02719 352 Pfam SAWADEE domain 6 139 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02719 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:129767199 Laca7g02719 Laca-Chr7:129815889 tandem