AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02726 | ATGAGTGGGGGTAGGGTTACCATTCCAAACAATGTACGGAAGACGATCCAGAACATCAAGGAGATCACAGGTAATCACAGTGAAGATGAGATATATGCAATGCTTAAAGAATGTTCCATGGATCCAAACGAGACCGCTCAGAAGCTCCTCTTACAGGACCCATTTCATGAAGTTAAAAGGAAACGTGACAGAAAGAAGGAGAATCCGAGTAAAGAATCTACAGAGTCTAGATGGAAACCTGGGATGCAGGGAAGGGGTAACAGGGGTGGCAGAGGGAACTACTCATCTCGCCACATGTCTAATGATGCAGGTGGTGGAAGAACAGGTCTTTCTGCAAAGGAAAACGGGATAATCAATAAAGGTGCAGAGGAAGGGGCAAATCAGTCAATTCCTCAGGGTCAGAAGAGTAAAGATACATCTGTCGAAAGTGATAAGAAGCAATCTGAAGTGACTTCATCTACTTCTAGTAGTAAGATGGAGGGCCAAGTGCCAAAGGTTGTTCCTGTTGAGGCAAGTAAGATCATGTTGACTTCCAAGAACACATCCGCATCAACATCGCCTTCACCAGGGGTATATTTGTCCGAAAAAGATCCTATTTTGATGCCATCACAAGATTCACGGTTGTCTGTGGGAGCTATTAGACGTGAAGTTGGGAGTAAAGTAGCTGCAGCTGAACAAATTCAAGAGACCCCTCTTGTGATCAAATCAACTGCTTCTGGTTCTGAGCAAGGGAAGGTGGGACCCAGTGAGCTTCAGGGAGTGGGGAAGAATGTGGTTTCAGAGTCTTCTTCAAGACCAGGATCATCTTCTCATGTCTCCTTTTCCAGGCCTTCATCAAGTTACAATAATAGGATGCAACAAGCAATTGGACCTCAAAAAGTTGGACCTAGCATGGAATGGAAACCAAAACCAATTGCTCAAAGTCAAGGGTCAATTAAGGTGCCTGTGGCTGTGGTTCCAGTTGAAGCTCATACTCCAACAACAGTTTCTTCTGCATCCTCCGCTAATCTTGATTCAAAGGAGGATGAAGTTGAGAAGAAGCTAAAGGAGTCCCACATTTCAGATGATAAACAACATGTGATTATCCCAAATCACCTTCATGTTCCTGAAGCCGAAAAACTCGGCTTCTGTTTTGGGAGTTTTGATGCCACTTTTGGTTTTAATAAAACCTCCTCAAACTCAAATGGTCCTGTGGCTGTGGCTGTGGCTGTGAGTGACAAGACTTCTGAAGCATCTGAGGAGGCTGATGAAACTATAGAGGACCAAATACAGTCCAGAAACGAAAATGCTGATGGAGAGGAGGATCATCTTGAACGCCCTACCACATCTTCATCTAATGTACCCGAGAGTTTACCAATGGAAGGTGACATGTCATCGAATGCGGGACCCGAGTACAGAGAGCCAAAGCAAGAGATTTCTTCTTCTTCACTTCCTACTCCAAGTCATCAATACCCAGTTGTTCATACATCTCCAAATCCAAACTTCAGTTTTGGGTTCATGCCACCAATGATTGGAAGCCAAGTCACCTCTTTTGAAAACACCGAGTCTCAGACACGCGATGCTTCTCATGTCCCAAGCTTTGTAGTTCAGCAACCGTTTGATCCAGCAAGCTATTATGCTCACTTTTATCGTGAGAGTGATGGACGCATGTCGCCTTTCCACTCAACCACAAAGTACAATGGAAATGTTCCACAACCTTCTCTCTCTTCTCAAGAGGTTGGGAACTCACTAATGTTATCCACCACCAGTCCAACGCCAACAGCCGCCACGCAAACCGCTGGAGTCATGCAAAGCTCCATATCCGTCACTCAACAACCACTACCTGTTTTCCGGCAGCCAGCAGGGGTTCATCTACCCCATTACCCTCCAAATTACATCCCATACGGTCCATATTTCTCCCCATTTTATGTCCCTCCACCAGCTGCTATCCATCAGTTTTTAAGCAACGGGACATTCCCACAACAACCACAGCAAGGCGGTGGCGGCATGTATCCAGCACCACCACCAGTGGCCGCCTCTAATTCTAAATACCCGCTTCCACAGTATAAGCCCGGAAGCAATAACTCGGGACATATTGGAATGGCGGGAAGCTATGGACCATATGCTTCACCACCCCCTGCTGGTTATAACCCTGGTTCAGCTGCTGCCAATTCCACCTCTAATGAAGACCTTGGTGGGTCCCACTCCCACTCACACTCCCAGTTTAAGGAAACTAATGTTTACATCACTGGTCAACAGAGTGAAGGTCCAGGTGTATGGATAGCGGGACCCGGACCCGGACGAGACATGTCGGGTTCTTTCTATAATCTTCCTCAAGGTGGTCAAGTGGCATACACCACCCCAACACAACAACCTAACCACGGCCACACGGCGGCCTTTGCTAATATTTATCACCCGCCTCAACCGGTAACCACGGGTGCGGTTCACCCGCTGGCTGGCGGTGGACCGGGTAGTGTGGACATGGTGGGACCCGCAGCAGCAGCAGCAGCTAGTGTCTATCAGCAGCAACAACCCCAACCAACTCAAATCAACTGGCCTAACAACTACTAA | 2550 | 47.25 | MSGGRVTIPNNVRKTIQNIKEITGNHSEDEIYAMLKECSMDPNETAQKLLLQDPFHEVKRKRDRKKENPSKESTESRWKPGMQGRGNRGGRGNYSSRHMSNDAGGGRTGLSAKENGIINKGAEEGANQSIPQGQKSKDTSVESDKKQSEVTSSTSSSKMEGQVPKVVPVEASKIMLTSKNTSASTSPSPGVYLSEKDPILMPSQDSRLSVGAIRREVGSKVAAAEQIQETPLVIKSTASGSEQGKVGPSELQGVGKNVVSESSSRPGSSSHVSFSRPSSSYNNRMQQAIGPQKVGPSMEWKPKPIAQSQGSIKVPVAVVPVEAHTPTTVSSASSANLDSKEDEVEKKLKESHISDDKQHVIIPNHLHVPEAEKLGFCFGSFDATFGFNKTSSNSNGPVAVAVAVSDKTSEASEEADETIEDQIQSRNENADGEEDHLERPTTSSSNVPESLPMEGDMSSNAGPEYREPKQEISSSSLPTPSHQYPVVHTSPNPNFSFGFMPPMIGSQVTSFENTESQTRDASHVPSFVVQQPFDPASYYAHFYRESDGRMSPFHSTTKYNGNVPQPSLSSQEVGNSLMLSTTSPTPTAATQTAGVMQSSISVTQQPLPVFRQPAGVHLPHYPPNYIPYGPYFSPFYVPPPAAIHQFLSNGTFPQQPQQGGGGMYPAPPPVAASNSKYPLPQYKPGSNNSGHIGMAGSYGPYASPPPAGYNPGSAAANSTSNEDLGGSHSHSHSQFKETNVYITGQQSEGPGVWIAGPGPGRDMSGSFYNLPQGGQVAYTTPTQQPNHGHTAAFANIYHPPQPVTTGAVHPLAGGGPGSVDMVGPAAAAAASVYQQQQPQPTQINWPNNY | 849 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 220 | 283 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 255 | 283 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 146 | 161 | - | - | |
| Laca7g02726 | 849 | SUPERFAMILY | UBA-like | 8 | 70 | IPR009060 | GO:0005515(InterPro) | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 45 | 198 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 174 | 191 | - | - | |
| Laca7g02726 | 849 | PANTHER | FLOCCULATION PROTEIN (DUF1296) | 1 | 849 | IPR044277 | GO:0051082(PANTHER) | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 230 | 246 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 419 | 440 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 53 | 74 | - | - | |
| Laca7g02726 | 849 | Pfam | GBF-interacting protein 1 N-terminal | 8 | 67 | IPR009719 | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 469 | 483 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 651 | 688 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 712 | 733 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 709 | 733 | - | - | |
| Laca7g02726 | 849 | MobiDBLite | consensus disorder prediction | 407 | 483 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02726 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 116394 | Laca7g02726 | Laca9g03332 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr4:20413900 | Laca7g02726 | Laca-Chr7:129934185 | dispersed | |
| Laca | Laca-Chr5:123035893 | Laca7g02726 | Laca-Chr7:129934185 | dispersed | |
| Laca | Laca-Chr6:70657554 | Laca7g02726 | Laca-Chr7:129934185 | dispersed | |
| Laca | Laca-Chr7:129934185 | Laca8g03537 | Laca-Chr8:144719236 | dispersed | |
| Laca | Laca-Chr1:136150000 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr1:136151095 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr2:70282410 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr2:70283791 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr3:4183262 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr3:55995358 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr3:55997734 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr3:155471155 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr4:86905684 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr5:46955705 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr5:253957806 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr6:45290478 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr6:45292566 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr7:9049977 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr7:9050852 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr7:26863974 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr7:71156009 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr7:71158311 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr7:138430036 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr9:36589157 | Laca7g02726 | Laca-Chr7:129934185 | transposed | |
| Laca | Laca-Chr7:129934185 | Laca9g03332 | Laca-Chr9:136458517 | wgd |