AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02730 ATGGCGTCGCTGGTGCCCGTCGACGATAACTCCAATACGAAATCAGAGGAGGGAACAATGGCGTTTCACAAGAAGCGGGCTCGGCGCGTGAGCTTTGCAGAGAACACATCTGTTCACATATTTGACCGTGATGAAGACTCAGGAACTCCATTGGAGCCTAAGCCTCCTAGTTCTCCATCAGATGAATTAGGTTCGGGTGAGCTCAATCATGAACGGGGCCAGTTGTTCTGGAATGTAGATGAAGATGATAATGATAACAATAACGAAGATGATGACATGGATGAGCCCGGATCAAGGAGTCCGTTTTTGCGGTTTATTGGTTCTCCGTCCTCCGGTGGAAGTACAGTTGGCTCTGCTAACTCCAACGACGAAGATAATTTTTTTGGTCCTGTATCAGCAAATTTTATCAGACGAGATTTACTGGACTCTTCAGCTTCAGATGCAAATCATGATCAAACTATGGATTCAACAGCCTTTTCAATGCATTTTCGTAGCATTGCTAGGTCAGACTCAGAAGTGGAACTGAAAACCTCAACTGGGGTCCACCTTTCCTTTGATGAGAAAACCCCAACTCATGATTCTGTTCCCAATAATACAGGAAATTCAATGTTAATGACACTAGCTAAGAAGCCAGATTATCGACCTTCTTTATCCACCTCCAAATTAAGCACTGCATCTGAGTCGAATGATATGAGTATTGTTGGAGAATATCACTATAAGTATGACTATGGAGAACTATCTCCTACATTGGATGCACTCATGGCAGATCCTTCTGGTGTTTCTATCTTGAAATCACCAAGAAATGTTGAAGCAACCATGGAAAATGGGGATAACCTCATGGATTTGAGTTGTAATGAAGATAATGATTTACAAGGGATTAGTGGTCATGAGTTGGTCAATGTTGATGCATTTCAGATAAAGTCAAACTTAGGCTTCTCTACAATTGGTCAAAGCAATCCTAGTCCTAAAACCACAATTTATATAAATGATGTTATTGGAAAGGAACATAAATCTCCTTTTATAGATGGTGTTATTCCATCTAAATCACCAATGTATGTGACTCCTTCTCATAATCGTTCAAGTGTTTTTGTAAGAACAGAAGATGAAGAACATGTTTTGAGTATTCAATCCATGCAAAAAAGCATTTCCAAACTCAAGATGCTTAAAGCTTCTCCCTTTTCTGCTGCTTTGAGTGCTAAACTTGAAGATTCAATCATCAAATCTGTCACCAGACCCTCTAAGATGACTCCTTTGAATACTTTGTTGGAGAAAAACGACAAAAGTCCCTTACTCAATTCTGTAAAAGACAGTGGTCATTTATCATCTGATGTTCAGAAAAAGAGAGCAAGAGAAAGTTCAACAAACATGAATGATATTAGGTTCGAGACACCAAATAATATTGTCCCTGTGACTCGTTTGCAAAAGATTGTTGAAATTGCATCACCATTGTTGATACCACATGAAACCACACACTCTAAACACACAACTGTTTTGCCTCAAAGTTTGGATTTTTCTTCACAGAAAAGGTTAAAGGTTGTAAATACAACAGGATTTAGAAGCAGCCCTTTGAGGATAGAAAAATCTGGTTCATTAGTTTCTTCCACTCAAGATGAAATGGTGGATATTAGGGAGGTTTCTCTTCACGAGGTTTGTTGTGACTCAAAAACTAAAGATAACCCTACAATCTTATTGAAAAATGAAGAACATGAGAAGTTTGAAGACAAGTTTATGGGAAGTGACATTGTTCTTGAAGAGATGAAAGGAGCTTCTCCTGTTTTTGATGAAGGGACAGATAAACAATCTTGGAAGAAGAATTTACATTATCAGTTTTGTGAAAGCCCTTCAAATAAACAGCCATGCAATAACAATTCACTGCAAGATGAAGATATGATGATTGAGATAACTGCTACAACTCACACAAGTCCAAAAGCTCATGTACACCCTGAAATCTCAAAAGAAAATGAAATATCAACACTTGTGCAAAAATTAAACCATCCGAATGAGATAAAGACAATGGTTTCTAATGAAGTGGAGAAACTTTTATCTCATTCTGTTGATAAGTTTAATTTGCGTGTGATTGATCGTTTATCAGACATTGTGGATCAACTTTTAATGTCAAAAACATATCAGCTTCTCTCTGATGAAATCCAGTCTCAGAAAAGTGTAGATATCAGCAAAAAATCGCAACATAAAAGAGCCTCAGAAATAAAATTGCTCTTGTGCAAATTTGTACATGAGAAAGCAAAGTTGCAGTTAATGCAAGTGAAACAAGAGATGTTACTGAAAAGGGTAAAATCACTTGCATCTGGAATATCAGAGTCTGAAGAATTAAAGTCAAACTTCCCGCCAAGTGAGTCAATGTCAGTCAATATGAACGGCATTCAAGAGAGTCAAATTGAGAGTGACAAAGTGTCTTCAACAAGACTGGATTTAAATAATATTGACCAAAAAATTGAAAGTTTGACCAAATCTTTCCACAAGTCATGTAAGATGAAAGAAGAACTGAGCTCCCTTGATACTATCACATTTGTGAATAACCATTTGAGGAAGCAAGCATGCTGCCAGATCATACGAAAGGATATGCAGCTTTGGGTTGTAGACAATCTGAAGAATAGAAACGGTTGCCACAGTGTTGATCTCAATTATCTTGACTTAATGACTCAAAGGTTATCACTAAATGCTGATCGAGTCCCGAGTGTTTCCATTTCTTATGAACTGAATGATGTAAATATTAGTAAGATTTTCAAAGATATGGAAGCTTGCACTGCATTTAGATTTGTATTTACACAGAAGCATGTTGATGGGTCAAACTTGGCAAAAGAAACTCAAGTGACTGGTGCCCTTTTTGGTAATTTATTAGATGTAATGGAAGAAATACAACATTCAAGAATAGAGCTTAAAAACCTAATTTCTACAAGATTTCGCACACCCTTAGCGGATCAACTTGACCTAGACCTCTGTTTCTTTGATCCAAAACATCGCAGGAAGGCAACAGTCACTTTAAACTTTTCATGTTTAAAAAGGGGTATATATCCATCCGAGATCATTCCATATCAAATTCACATTCCAGCCAATCAACAATCAAAATCCTCACCTACACTTGCAGATGAGATTACAACAACACTTAAAAATCTTAAAACGGGATTTTTAAGGATTCAACGCGTATGCACTTGCATTTCCAACAAGCTTGTTGGTTCCGGAGGTAAGGAAGGAAGGAAGACGCCGGATGGTGATAAAGGTGAACAAGAATCTAATCTGATGTTCCATTTTCAAGTTAGGAAAAAGCTTGATATCTTACACAACAAAACAGTAAAGAACATCCACAACCAACGCCTACCTCACAACACAGCCGCAGAAAACAAGGAGGAAGACGAGAAAGGTCCGATCTTGATTAGGGTTTTTAAATCCTACAACAGAAATACATCTGCTTTGCTTCAGTGTAATTGGGTTTATAATTTGGTTGCATAG 3468 37.63 MASLVPVDDNSNTKSEEGTMAFHKKRARRVSFAENTSVHIFDRDEDSGTPLEPKPPSSPSDELGSGELNHERGQLFWNVDEDDNDNNNEDDDMDEPGSRSPFLRFIGSPSSGGSTVGSANSNDEDNFFGPVSANFIRRDLLDSSASDANHDQTMDSTAFSMHFRSIARSDSEVELKTSTGVHLSFDEKTPTHDSVPNNTGNSMLMTLAKKPDYRPSLSTSKLSTASESNDMSIVGEYHYKYDYGELSPTLDALMADPSGVSILKSPRNVEATMENGDNLMDLSCNEDNDLQGISGHELVNVDAFQIKSNLGFSTIGQSNPSPKTTIYINDVIGKEHKSPFIDGVIPSKSPMYVTPSHNRSSVFVRTEDEEHVLSIQSMQKSISKLKMLKASPFSAALSAKLEDSIIKSVTRPSKMTPLNTLLEKNDKSPLLNSVKDSGHLSSDVQKKRARESSTNMNDIRFETPNNIVPVTRLQKIVEIASPLLIPHETTHSKHTTVLPQSLDFSSQKRLKVVNTTGFRSSPLRIEKSGSLVSSTQDEMVDIREVSLHEVCCDSKTKDNPTILLKNEEHEKFEDKFMGSDIVLEEMKGASPVFDEGTDKQSWKKNLHYQFCESPSNKQPCNNNSLQDEDMMIEITATTHTSPKAHVHPEISKENEISTLVQKLNHPNEIKTMVSNEVEKLLSHSVDKFNLRVIDRLSDIVDQLLMSKTYQLLSDEIQSQKSVDISKKSQHKRASEIKLLLCKFVHEKAKLQLMQVKQEMLLKRVKSLASGISESEELKSNFPPSESMSVNMNGIQESQIESDKVSSTRLDLNNIDQKIESLTKSFHKSCKMKEELSSLDTITFVNNHLRKQACCQIIRKDMQLWVVDNLKNRNGCHSVDLNYLDLMTQRLSLNADRVPSVSISYELNDVNISKIFKDMEACTAFRFVFTQKHVDGSNLAKETQVTGALFGNLLDVMEEIQHSRIELKNLISTRFRTPLADQLDLDLCFFDPKHRRKATVTLNFSCLKRGIYPSEIIPYQIHIPANQQSKSSPTLADEITTTLKNLKTGFLRIQRVCTCISNKLVGSGGKEGRKTPDGDKGEQESNLMFHFQVRKKLDILHNKTVKNIHNQRLPHNTAAENKEEDEKGPILIRVFKSYNRNTSALLQCNWVYNLVA 1155
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02730 1155 MobiDBLite consensus disorder prediction 104 124 - -
Laca7g02730 1155 MobiDBLite consensus disorder prediction 1 17 - -
Laca7g02730 1155 MobiDBLite consensus disorder prediction 424 457 - -
Laca7g02730 1155 PANTHER OS06G0608100 PROTEIN 302 620 - -
Laca7g02730 1155 MobiDBLite consensus disorder prediction 424 439 - -
Laca7g02730 1155 MobiDBLite consensus disorder prediction 440 455 - -
Laca7g02730 1155 MobiDBLite consensus disorder prediction 18 50 - -
Laca7g02730 1155 MobiDBLite consensus disorder prediction 1 124 - -
Laca7g02730 1155 Pfam Knl1 RWD C-terminal domain 810 955 IPR040850 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02730 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
116398 Laca7g02730 Laca9g03322
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:129975703 Laca9g03276 Laca-Chr9:133834848 dispersed
Laca Laca-Chr7:129975703 Laca9g03322 Laca-Chr9:136118427 wgd