AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02756 ATGAATGTAATTTTTGTGATTGTTGAAGGTGATGGTGCTAAAGAAGGAGATGATAGTGTTAATCAGTTGAAAACATATCCAGCGGAAAAGAAAGCAACTTCTAATGTGCATGAGATAATACTGAACACCAACACCAAGTTCAGCTTAATGAGTACCTTCGATGTTGGCGCATTGATCGAAGTCGGGGGACTCACCAATCAGATGGTTTGGATAAAGGAAGCAATACGGGTTGCAGGGAGTAGAGTCAAGGGTTATTATGGTTTTGGTAGATCATATGGTTTGTTATGGGTCAAGTTTACAGTCGGGAAGGGTCTTCAAGAAGAATATGAGTGGCCATTTTCGAGTGGGCTTGTAATGGGAACTCGCGTTTGGAATCGCGAGCGTATCCGTGCACGGTCTATAGTAAGAAAGATGTGGATCAAGAAATTTTTATGTCAAAGGCCTCAACTGGAGGGTTCAGGATTTAGCTTATGTGTCTGTGCTCTGGGATTGTTCACCTATGTAAAGGTCGCGCAAGTGATGATGGAAATTGTGGTTTTCAAATACACTCGGCACAGTCAAATCATCATCCACTTCACAGAAATGGCAAAGCAAAAGATTGTGGTGAAGGTCACAATGAACAACGAAAAGAAAATCCGTAAGGCTCTGAAAATCGCAGTTAGTCTCTCCGGTGTGGAATCAGCATCTTTCGTGGGATCAGATAAAACCCAAATCGCTGTGACTGGGGAACATGTCGACTCAGTTGAACTGGCGACCTTGCTAAGGAAAGGTGTTGGATACACAGAGCTACTGAGTGTTGGTCCGGTGGAGGAGAAGAAACCAGCCGCCGCAAAGGAAACAAATCCCACGGTGGCGCCACTAGATTTTACAGTTAATCCATACCAATATTACTACGGCAGCTATGGGATGCCCTACTATGCATATTAG 927 43.8 MNVIFVIVEGDGAKEGDDSVNQLKTYPAEKKATSNVHEIILNTNTKFSLMSTFDVGALIEVGGLTNQMVWIKEAIRVAGSRVKGYYGFGRSYGLLWVKFTVGKGLQEEYEWPFSSGLVMGTRVWNRERIRARSIVRKMWIKKFLCQRPQLEGSGFSLCVCALGLFTYVKVAQVMMEIVVFKYTRHSQIIIHFTEMAKQKIVVKVTMNNEKKIRKALKIAVSLSGVESASFVGSDKTQIAVTGEHVDSVELATLLRKGVGYTELLSVGPVEEKKPAAAKETNPTVAPLDFTVNPYQYYYGSYGMPYYAY 308
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02756 308 PANTHER OS04G0464100 PROTEIN 198 281 IPR044296 -
Laca7g02756 308 Gene3D - 193 272 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02756 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:130950652 Laca7g02756 Laca-Chr7:130983712 dispersed
Laca Laca-Chr7:130959020 Laca7g02756 Laca-Chr7:130983712 dispersed
Laca Laca-Chr7:130981978 Laca7g02756 Laca-Chr7:130983712 tandem
Laca Laca-Chr7:130983712 Laca7g02757 Laca-Chr7:131023649 tandem