AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02765 ATGGTGGATGTGGATGCTAAAGAGAACGAGGGTGGTAATGGCGATGATAAGAAGAAGAACCGTCTATGGATGCGGTGGGGAATTATCGGAGCTGTGATCACAGTTTTAGTTGCCCTATCTCTCAATCCTTGGCGGAATTCTCTCAATCTATCTCTCCTCCATAAATCGTACCTCTGTTCTGAGGATACTTGTAAATACACAGGCCTCATTGAGGACTGCTGTTGCGACTTTGAAAGTGTCGATGATATTAATGGAGCAGTTCTACATCCATTGTTGCAAGAGCTTGTTACCACTCCCTTCTTCCGATACTTCAAGGTTAAATTATGGTGTGATTGCCCTTTCTGGCCTGATGATGGAATGTGTAAAATGCGTGATTGCAATGTATGCGAGTGTCCAGAACATGAATTCCCCGAATCTTTTAAAACACCATCATTAAACGTTCTTCCAAAAGATGATCCTGTATGTCAAGAGGGAAAACCAGAAGCTACTGTGGATCGAACCCTAGATGACAAGTCGTTTAAAGGCTGGGTAGAAGTCGATAATCCATGGACTCATGATGATGAAACTGATAATGAAGAAATGACGTATGTGAATCTGCAATTAAATCCCGAACATCATACTGGATACACGGGTCCATCAGCTAGAAGAATATGGGTTGCTATATACTCAGAACATTGTCCAAGATATGCATATGGGGAGATGTGCCCGGAGAAGAAAGTACTATACAAATTAATATCTGGTCTTCACTCTTCAATTTCAATCCACATAGCTGCTGATTATCTTCTTGACATAAAAAATAATAAGCGGGGTCCAAATCTTAAATTGATGCGTGACCGAGTATTGAAACATCCTGATCGCGTGCAAAATCTTTACTTCACTTTTTTATTCATTCTTAGAGCTGTGACAAAAGCAGGTGGTTACTTGGATGAGGCGGAGTATGATTCAGGGAACGATTTAGAGGATGTGAAAGCGGGAGAATTGATAAGAAGATTGGTACAAAATCCGAAATTACAAGCTGCATGTGCACTTCCATTTGATGAAGCTGAATTATGGCAAGGTCAAGGTGGGCCCATGCTTAGGCAACAGATCCAAAATCAATTTCTAAACATCAGTGCACTGATGGACTGTGTGGGTTGTGAGAAGTGTCGTCTTTGGGGAAAACTTCAGATTCTTGGTATTGGAACAGCGTTAAAAATTCTGTTTTCTGTTAATGATAAGGAAAACCCGGACACACATTTGCTGTTACAAAGAAATGAAGTGATTGCTCTAGTTAATTTACTAAATCGGCTATCGGAGTCTCTTATATTCGTTAATAAAATGGGGACTCCTCCTAAAGAAATAATCAATAGACCATGGGGATTCTCGTCAGTGGCTTATTGGTGGCTAAAATCTAACCAACAATTGTCATTGTCAACAAACACCACCGACCCATTTTGA 1437 40.5 MVDVDAKENEGGNGDDKKKNRLWMRWGIIGAVITVLVALSLNPWRNSLNLSLLHKSYLCSEDTCKYTGLIEDCCCDFESVDDINGAVLHPLLQELVTTPFFRYFKVKLWCDCPFWPDDGMCKMRDCNVCECPEHEFPESFKTPSLNVLPKDDPVCQEGKPEATVDRTLDDKSFKGWVEVDNPWTHDDETDNEEMTYVNLQLNPEHHTGYTGPSARRIWVAIYSEHCPRYAYGEMCPEKKVLYKLISGLHSSISIHIAADYLLDIKNNKRGPNLKLMRDRVLKHPDRVQNLYFTFLFILRAVTKAGGYLDEAEYDSGNDLEDVKAGELIRRLVQNPKLQAACALPFDEAELWQGQGGPMLRQQIQNQFLNISALMDCVGCEKCRLWGKLQILGIGTALKILFSVNDKENPDTHLLLQRNEVIALVNLLNRLSESLIFVNKMGTPPKEIINRPWGFSSVAYWWLKSNQQLSLSTNTTDPF 478
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02765 478 Pfam Endoplasmic Reticulum Oxidoreductin 1 (ERO1) 88 434 IPR007266 GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro)
Laca7g02765 478 SUPERFAMILY ERO1-like 75 445 IPR037192 -
Laca7g02765 478 PANTHER ERO1-RELATED 29 443 IPR007266 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(InterPro)|GO:0015035(PANTHER)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0034975(PANTHER)|GO:0071949(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02765 K10950 ERO1-like protein alpha [EC:1.8.4.-]
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Event-related genes

Select Gene_1 Gene_2 Event_name
116400 Laca7g02765 Laca9g03302
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:132139800 Laca9g03302 Laca-Chr9:135812375 wgd