AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02781 ATGGGGAATAAGTTGGGTAGGAGGAGACAGCTAGTGGACGAGAAGTATACAAGACCTCAAGGGCTTTATCAACACAAGGATGTAGATCACAAGAAGCTTCGTAAGCTTATACTTGATTCCAAGCTCGCTCCTTGCTATCCCGGAGATGATGACTGCAGTTGCGATCTTGAAGAATGCCCGATTTGTTTCTTGTATTATCCAAGTCTAAATAGATCGCGATGTTGCACAAAAGGCATCTGTACAGAATGTTTCCTACAGATGAAGACCCCAAATTCTACACGCCCTACGCAATGCCCCTTTTGTAAAACGTTAAACTATGCTGTGGAGTATAGAGGGGTGAAGACTAAAGAGGAAAAAGGGCAAGAACAAATTGAAGAACAAAGGGTGATAGAAGCAAAAATAAGAATGAGACAACAAGAAATTCAAGATGAAGAGGAAAGAATGCTAAAAAGACAAGAGAGAAGCTCTTCAAGCAGGATAATTGATTCAAATGAGGCTGAATATTTCTCTAGAGCAGCAACGTCTTCTTCAGAAGGCGAGGAAATTGTTTCTGCTCCGAATTCAGGTGTAACAATAATTAGACATCCTCAACGCCCTAGGGACAACAGAGATGACGAGTTTGACCTTGACCCCGAGAACATAATGCTAATGGAAGCCATCTGGTTGTCATTTCAGGAGGATGGAAAAACCCAACGCCAGAATCCAAATTACGGTGACGCAGCACAATTAGCAAAATACGCAACAGAAGTTCGTGTTCTCGCGTCCATGGCCCCACAAGCTGAGTCATCATCATTATCATCCACATCCTCATCCTCATCCTCATCGCCTTCCGGTGGTCTAGCGTGCGCCATAGCCGCCCTCGCCGAACGCCAACAAATGAGTGGGGAATCTTCCACCAATTACAACAACTACAATGGCAACATGTCATCAACATACAACATCATGCATCCCGAATCCACCTCTCTCAATACTCATCTTCAAGATGGAGGATGGGGAAACAACAACAATATTGAAACTTCATATGGGTATGATGATGATAATAATAATGAGTATGGGGGACATGATGAGATGGGTGGTGGTGGTGGAGGTGGTGGAAGTATAGTTCCTGAGAGCTTTGAGGAGCAGATGATGTTGGCAATGGCGGTTTCACTGGCGGAAGCTCGAGCTAGGAGTAGTAGTGCACCGGAGGTTGCGTGGATTTAG 1203 44.56 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKTKEEKGQEQIEEQRVIEAKIRMRQQEIQDEEERMLKRQERSSSSRIIDSNEAEYFSRAATSSSEGEEIVSAPNSGVTIIRHPQRPRDNRDDEFDLDPENIMLMEAIWLSFQEDGKTQRQNPNYGDAAQLAKYATEVRVLASMAPQAESSSLSSTSSSSSSSPSGGLACAIAALAERQQMSGESSTNYNNYNGNMSSTYNIMHPESTSLNTHLQDGGWGNNNNIETSYGYDDDNNNEYGGHDEMGGGGGGGGSIVPESFEEQMMLAMAVSLAEARARSSSAPEVAWI 400
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02781 400 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Laca7g02781 400 MobiDBLite consensus disorder prediction 143 162 - -
Laca7g02781 400 PANTHER PROTEIN SIP5 1 299 IPR039301 GO:0005737(PANTHER)
Laca7g02781 400 MobiDBLite consensus disorder prediction 143 160 - -
Laca7g02781 400 MobiDBLite consensus disorder prediction 171 208 - -
Laca7g02781 400 MobiDBLite consensus disorder prediction 259 279 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02781 - -