Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02785 | ATGTCACTTCCAGCGTTTTTTGAAGCCGACGGCAAGAAAAACCCTGTCTTTGACGCGTTCCGCAACGTCAACCATGTATCACCAGAAGCAATTGTCGATCTCGACTACAATGGCTCAGATAGTGGCGCTCCTTGTCTTCAACAGATAAGCACCAATCTTGGTGCAATGTATAAGCAGATGGTCAGCAACGCCACTGACCCGTTAAGTTTCTTTGGTGGCGAGTTTCGGGCTGGAGATGACCCGTTCGGAAATGGTGACCCATCTATCGGGTCGATAGAGGCTGGTTGTCATACAGCAGTGCATAGATGGACAGGTAATCCAAGAATGCCAAACAACGAGGACATGGGGAATTTCTACTCTGCGGGGTACGACCCTGCGTTCTACGTCCACCATGCAAATGTTGATCGTATGTGGAAAGTATGGAAGGATTTAGGTATCAAAGGACACACTGAACCTACAGACCCTGATTGGCTTAATGCATCATACGTGTTTTATGATGAAAACGAAGAGCTTGTACGTGTTTACAACAAAGATTGTGTCCAAACTGAAAACTTAAAATATGATTTCGAATTATCCCCACTCCCTTGGCTCAAGAACCGACCCGTTGCACATACCAAACCAGAGACCACCACGAAACCTGTTGAAAAGGTTAAAGTGCCGGACGTGAAGTTCCCCATTAAGCTAGACAAGATACAGAAGGTACTTGTGAAGCGGCCAGCGAAAAACCGAAGCCAATCGGAAAAGGAAAAAGCGACTGAGCAGTTGTTGATCAAAGGAATCAAGTTTAATGTCTCCAAGTTCGTCAAGTTTGATGTGTTTGTTAATGACCAAGATGATGTTCCCACAAGCTCGGCATCCGAGAGCGAGTTTGCAGGTAGTTTCGCACAGTTGCCTCATCACCATGGTGGCCACAAAAAGTTAATGACAAGTGCAGCAAGGTTCGGTTTAACAGAGCTTTTGGAGGACATCGGAGCCGAGGATGATGAGTATATTTTGGTGACATTGGTGCCAAAGGTAGGGGCCGAAGATCTCACCATTGATGAAATCAAAGTGGAGTTGGTTCCTATTGTTTAA | 1074 | 45.81 | MSLPAFFEADGKKNPVFDAFRNVNHVSPEAIVDLDYNGSDSGAPCLQQISTNLGAMYKQMVSNATDPLSFFGGEFRAGDDPFGNGDPSIGSIEAGCHTAVHRWTGNPRMPNNEDMGNFYSAGYDPAFYVHHANVDRMWKVWKDLGIKGHTEPTDPDWLNASYVFYDENEELVRVYNKDCVQTENLKYDFELSPLPWLKNRPVAHTKPETTTKPVEKVKVPDVKFPIKLDKIQKVLVKRPAKNRSQSEKEKATEQLLIKGIKFNVSKFVKFDVFVNDQDDVPTSSASESEFAGSFAQLPHHHGGHKKLMTSAARFGLTELLEDIGAEDDEYILVTLVPKVGAEDLTIDEIKVELVPIV | 357 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02785 | 357 | Pfam | Protein of unknown function (DUF-B2219) | 224 | 353 | IPR022740 | GO:0004097(InterPro) | |
| Laca7g02785 | 357 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 124 | 135 | IPR002227 | GO:0016491(InterPro) | |
| Laca7g02785 | 357 | PRINTS | Tyrosinase copper-binding domain signature | 96 | 107 | IPR002227 | GO:0016491(InterPro) | |
| Laca7g02785 | 357 | PRINTS | Tyrosinase copper-binding domain signature | 123 | 141 | IPR002227 | GO:0016491(InterPro) | |
| Laca7g02785 | 357 | Gene3D | - | 1 | 191 | IPR008922 | - | |
| Laca7g02785 | 357 | PANTHER | TYROSINASE FAMILY MEMBER | 3 | 321 | IPR050316 | - | |
| Laca7g02785 | 357 | Pfam | Polyphenol oxidase middle domain | 152 | 201 | IPR022739 | GO:0004097(InterPro) | |
| Laca7g02785 | 357 | Pfam | Common central domain of tyrosinase | 39 | 143 | IPR002227 | GO:0016491(InterPro) | |
| Laca7g02785 | 357 | SUPERFAMILY | Di-copper centre-containing domain | 12 | 196 | IPR008922 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02785 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 116404 | Laca7g02785 | Laca9g03277 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:133784883 | Laca9g03285 | Laca-Chr9:134674409 | dispersed | |
| Laca | Laca-Chr7:133727316 | Laca7g02785 | Laca-Chr7:133784883 | tandem |