AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02805 ATGTCTGGGAGGAACCGTGGACCTCCGCTTCCAATGAAAGGTCCATCTCATGTTGGATTGGCGCCCATTCACGAGCCTCCATATGGAAGGAATCTAGGTCCAATTCCTCATCCTGCATTGCTTGAGGAGATGAGAGAAGCTCAATTTGGAATGGGTCCCAGACAACTCCCTCCTCACCCTGCTATCATTGAGGAGCGATTAGCAGCTCAACATCAAGACATTCAAGGGCTTTTGGTTGATAATCAGAGGTTAGCTGCAACCCATGTTGCACTCAAGCAAGAACTTGAAGCTGCACAACATGAGCTTCAACAAACAGATCGTTTTGCTCGCAATTTCCTCATGGAGAAAGATATGCAGATGAGAGAGTTATATGAGAAGTCAGCAAAAATGGAACACGATCTTCATGGAGTAGAAGCTATGCGAGCTGAGCTTATGCAATTACATGCTGACATCAAGGAGTTGACTTCTACACGCCAAAAACTTACTAGTCAAGTTCAGGGTATGACTCAAGATCTTGCTAGAGCTACTTCTGAGTTGCAGCAAGTTCCAGGACTGAAGTCAGAAATTGATGGGCTTAGACAAGAATTACAACATGCAAGGGCTGCAATTGAACATGAGAAGAAGGGGCATGCAGAGAACTATGAACATGGTCAAGTGATGGAGAAGAATTTACTCTCTATGGCTCGTGAGCTTGAAAAGCTGCGTGCTGAGATGGCAAATGCTGAAAAGCGGGCCCGTGCTGCTGTAGCTGTAGCTGTAGCCAATCAAAATCCAGGATATAACCCAAATTATGTCAATACTGAAGCTAACTATTCAGGGAATCCTTACCCTGCAAGTTATTCCATGAATCCTGTGCAACCTGGTGGTGAAGGTTACCCTCAGTATGGGCCTGGGCCTGGATCTTGGGGATCATATGATATGCAAAGGGCTCAAGGACACAGATAA 945 45.61 MSGRNRGPPLPMKGPSHVGLAPIHEPPYGRNLGPIPHPALLEEMREAQFGMGPRQLPPHPAIIEERLAAQHQDIQGLLVDNQRLAATHVALKQELEAAQHELQQTDRFARNFLMEKDMQMRELYEKSAKMEHDLHGVEAMRAELMQLHADIKELTSTRQKLTSQVQGMTQDLARATSELQQVPGLKSEIDGLRQELQHARAAIEHEKKGHAENYEHGQVMEKNLLSMARELEKLRAEMANAEKRARAAVAVAVANQNPGYNPNYVNTEANYSGNPYPASYSMNPVQPGGEGYPQYGPGPGSWGSYDMQRAQGHR 314
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02805 314 Coils Coil 182 209 - -
Laca7g02805 314 Coils Coil 81 101 - -
Laca7g02805 314 MobiDBLite consensus disorder prediction 287 314 - -
Laca7g02805 314 Coils Coil 217 251 - -
Laca7g02805 314 Coils Coil 137 178 - -
Laca7g02805 314 PANTHER PROTEIN FLX-LIKE 2 1 291 IPR040353 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02805 K27811 protein FLX/FLXL
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr3:50521206 Laca7g02805 Laca-Chr7:134839919 dispersed
Laca Laca-Chr7:134839919 Laca8g00158 Laca-Chr8:4898699 dispersed
Laca Laca-Chr7:134839919 Laca9g00593 Laca-Chr9:13033880 transposed