Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02825 | ATGAAACCGCCACAACCACCACCACTACCACCACCGTGTTCTGTTACTGTCGTTACTGAACACTCCTCATCCTCCTCCAGTTCTCCGTCCATTTCACCTGCTACTACCTCCGACATGTGGAATTACGTATGGATCCCTTTTCTGCTGTCTCTCATGAAAGAGGTCAGCTCCGCTAACGCTGCTTCCGAGTCAAAAATCTTCTTGCCCTCTGCTTCTGTTGCTGGTTTGACTTCATCGTGTCCTGCGCCGGATCCTAAGCTGAATTACCGCCCGATAATCGGAATTCTCAGCCATCCAGGCGATGGTGCCTCCGGTCGACTTAATAACGCTACTAACGCCTCGTATATTGCTGCCTCGTATGTCAAATTTGTTGAATCTGCCGGAGCTAGGGTCATTCCTCTCATCTATAATGAACCTTCGGAGGTTCTACAGAGTAAACTCAATCTGATCAATGGAGTGATCTTCACCGGTGGATGGGCTAAGACTGGCCTGTACCTTGATGTTGTAGACAGAATTTTTAAGCAAGTTCTGAAGAAGAATGATGCAGGCGACCATTTCCCATTGCTTGCAATATGCTTAGGTTTTGAACTCCTAACAATGATTGTTAGCAAAAACAATGAAATCCTTGAAAGCTTTAGTGCATCAGATCAAGCTTCAACACTCCAGTTCATTAAGAACATAAACATTGAAGGAACTTTGTTTCAAAGATTTCCTCCTGAGTTACTTGCAAAGATGAGCACAGAATGCCTGGTGATGCAAAACCATAAATTTGGCATATCACCAGAAACTTTTCAAGGAAACATGGAACTCTGCAGTTTCTTCAAGATCTTAACAACCAGTGTTGATGAAAATAACGAGGTATATGTATCAACAGTTCAATCAAAAAGTTACCCTGTGACAGCTGTCCAATGGCACCCAGAGAAAAATGCTTTTGAGTGGGGATTATCGATGATTCCACATTCAGATGATGCAGTTCAAGTGACTCAACATGTTGCCAACTTCTTTGTGAGTGAGGCTAGAAAATCGTACAACAGGCCGCCTACAAAGGAAGTGCTGGATAATCTAATTTACAATTTCAGCCCCACTTATTGTGGGTATGCTGGGAAGGGATACGATGAGGTTTACATCTTCACTGATAAGATTGCTCGAATGTGA | 1155 | 43.46 | MKPPQPPPLPPPCSVTVVTEHSSSSSSSPSISPATTSDMWNYVWIPFLLSLMKEVSSANAASESKIFLPSASVAGLTSSCPAPDPKLNYRPIIGILSHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPSEVLQSKLNLINGVIFTGGWAKTGLYLDVVDRIFKQVLKKNDAGDHFPLLAICLGFELLTMIVSKNNEILESFSASDQASTLQFIKNINIEGTLFQRFPPELLAKMSTECLVMQNHKFGISPETFQGNMELCSFFKILTTSVDENNEVYVSTVQSKSYPVTAVQWHPEKNAFEWGLSMIPHSDDAVQVTQHVANFFVSEARKSYNRPPTKEVLDNLIYNFSPTYCGYAGKGYDEVYIFTDKIARM | 384 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02825 | 384 | Gene3D | - | 86 | 378 | IPR029062 | - | |
| Laca7g02825 | 384 | MobiDBLite | consensus disorder prediction | 16 | 34 | - | - | |
| Laca7g02825 | 384 | PANTHER | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE | 44 | 378 | IPR015527 | GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER) | |
| Laca7g02825 | 384 | ProSiteProfiles | Glutamine amidotransferase type 1 domain profile. | 106 | 324 | - | - | |
| Laca7g02825 | 384 | FunFam | Folate gamma-glutamyl hydrolase | 87 | 378 | - | - | |
| Laca7g02825 | 384 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Laca7g02825 | 384 | Pfam | Peptidase C26 | 91 | 307 | IPR011697 | GO:0016787(InterPro) | |
| Laca7g02825 | 384 | SUPERFAMILY | Class I glutamine amidotransferase-like | 114 | 375 | IPR029062 | - | |
| Laca7g02825 | 384 | ProSiteProfiles | Gamma-glutamyl hydrolase domain profile. | 82 | 378 | IPR015527 | GO:0008242(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02825 | K01307 | gamma-glutamyl hydrolase [EC:3.4.19.9] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 116408 | Laca7g02825 | Laca9g03237 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:135364130 | Laca9g03237 | Laca-Chr9:131901212 | wgd |