AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02825 ATGAAACCGCCACAACCACCACCACTACCACCACCGTGTTCTGTTACTGTCGTTACTGAACACTCCTCATCCTCCTCCAGTTCTCCGTCCATTTCACCTGCTACTACCTCCGACATGTGGAATTACGTATGGATCCCTTTTCTGCTGTCTCTCATGAAAGAGGTCAGCTCCGCTAACGCTGCTTCCGAGTCAAAAATCTTCTTGCCCTCTGCTTCTGTTGCTGGTTTGACTTCATCGTGTCCTGCGCCGGATCCTAAGCTGAATTACCGCCCGATAATCGGAATTCTCAGCCATCCAGGCGATGGTGCCTCCGGTCGACTTAATAACGCTACTAACGCCTCGTATATTGCTGCCTCGTATGTCAAATTTGTTGAATCTGCCGGAGCTAGGGTCATTCCTCTCATCTATAATGAACCTTCGGAGGTTCTACAGAGTAAACTCAATCTGATCAATGGAGTGATCTTCACCGGTGGATGGGCTAAGACTGGCCTGTACCTTGATGTTGTAGACAGAATTTTTAAGCAAGTTCTGAAGAAGAATGATGCAGGCGACCATTTCCCATTGCTTGCAATATGCTTAGGTTTTGAACTCCTAACAATGATTGTTAGCAAAAACAATGAAATCCTTGAAAGCTTTAGTGCATCAGATCAAGCTTCAACACTCCAGTTCATTAAGAACATAAACATTGAAGGAACTTTGTTTCAAAGATTTCCTCCTGAGTTACTTGCAAAGATGAGCACAGAATGCCTGGTGATGCAAAACCATAAATTTGGCATATCACCAGAAACTTTTCAAGGAAACATGGAACTCTGCAGTTTCTTCAAGATCTTAACAACCAGTGTTGATGAAAATAACGAGGTATATGTATCAACAGTTCAATCAAAAAGTTACCCTGTGACAGCTGTCCAATGGCACCCAGAGAAAAATGCTTTTGAGTGGGGATTATCGATGATTCCACATTCAGATGATGCAGTTCAAGTGACTCAACATGTTGCCAACTTCTTTGTGAGTGAGGCTAGAAAATCGTACAACAGGCCGCCTACAAAGGAAGTGCTGGATAATCTAATTTACAATTTCAGCCCCACTTATTGTGGGTATGCTGGGAAGGGATACGATGAGGTTTACATCTTCACTGATAAGATTGCTCGAATGTGA 1155 43.46 MKPPQPPPLPPPCSVTVVTEHSSSSSSSPSISPATTSDMWNYVWIPFLLSLMKEVSSANAASESKIFLPSASVAGLTSSCPAPDPKLNYRPIIGILSHPGDGASGRLNNATNASYIAASYVKFVESAGARVIPLIYNEPSEVLQSKLNLINGVIFTGGWAKTGLYLDVVDRIFKQVLKKNDAGDHFPLLAICLGFELLTMIVSKNNEILESFSASDQASTLQFIKNINIEGTLFQRFPPELLAKMSTECLVMQNHKFGISPETFQGNMELCSFFKILTTSVDENNEVYVSTVQSKSYPVTAVQWHPEKNAFEWGLSMIPHSDDAVQVTQHVANFFVSEARKSYNRPPTKEVLDNLIYNFSPTYCGYAGKGYDEVYIFTDKIARM 384
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02825 384 Gene3D - 86 378 IPR029062 -
Laca7g02825 384 MobiDBLite consensus disorder prediction 16 34 - -
Laca7g02825 384 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 44 378 IPR015527 GO:0005773(PANTHER)|GO:0008242(InterPro)|GO:0034722(PANTHER)|GO:0046900(PANTHER)
Laca7g02825 384 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 106 324 - -
Laca7g02825 384 FunFam Folate gamma-glutamyl hydrolase 87 378 - -
Laca7g02825 384 MobiDBLite consensus disorder prediction 1 34 - -
Laca7g02825 384 Pfam Peptidase C26 91 307 IPR011697 GO:0016787(InterPro)
Laca7g02825 384 SUPERFAMILY Class I glutamine amidotransferase-like 114 375 IPR029062 -
Laca7g02825 384 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 82 378 IPR015527 GO:0008242(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02825 K01307 gamma-glutamyl hydrolase [EC:3.4.19.9]
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Event-related genes

Select Gene_1 Gene_2 Event_name
116408 Laca7g02825 Laca9g03237
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:135364130 Laca9g03237 Laca-Chr9:131901212 wgd