Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Laca7g02827	ATGTCACCGGTCTTGGTGGCTCTCCCGACGACCCACGATGTCCGACAGCAGCTTGGTGGTGATGTTTCGTTGGCGAGATGGCAGATGCAAGTATGGTGGTCGGCTCGGGCTAGCAATCCCTTGGCTTCACCGACAAGGAAATTGACGGGGGCTTTGCCAGTGGCGAACAGAGCAATCGAAACTCAACTGGATTTGGGTTTCGCTGATCGGCCACAACACTCAACTCCGATCTCCTTTTCTCTTATGAGACAAATGAGTTCTTCACTTCTTTATCTGATTTTCTCAACTCTCGTTTCCATTTACGTGCTCCAGTTTCAAGCTCAAGCTGCTCCTGCAGCTCCGGTGATTAAGCAATTATCTTCCATACTCAAATGGACAGCTAGGTCTTCTTCCAAATCACCATTATCAGATGGGAATATTCTTCAATTTGAGGATGGATATTTAGTAGAAACTGTCGTAGAAGGGAATCAGCTAGGGGTTGTGCCCTATTCCATCAGAGTCTCGCAAGATGGTGAACTGTTCGCTGTTGATGCAGTCAACAGCAACATCGTTCGAATCACTCCTCCATTATCTCAATATAGTAGGGCAAGATTGATTGCCGGATCCTTCCAGGGTTACACAGGACACGTAGATGGAAAACCAAACGATGCTCGTTTTGATCATCCAAAAGGTGTTACAATGGACGATAAAGGGAATGTTTATGTCGCTGATACATCTAATCTTGCCATTAGAAAGATCGGTGAAACAGGTGTGACAACAATTGCTGGAGGAAAATCAAATGTAGCAGGATACAGAGATGGCCCAAGTGAAGATGCACAGTTTTCATCTGATTTTGATGTAATTTACGTGAGACCAACATGTTCATTACTTGTTATTGATCGAGGAAATGCTGCTCTTAGACAAATTTCTCTCAATCAAGAAGATTGTGATTTGCACTCCACCTCTGTCTCATCCACAGATATTGTTTTGGTAATTGGTGCTATCGCAATAGGATATGTTGTAAGCATGATTCAACAAGGATATGGTTCATCATATTTCTCAAAAGTGGAAAAGGTGGAGAGTGATAGTAAGCCACTACAAAGCAAAGAGAAAACCTTAAAAATCACAAAAAATGTGGAAAGTGTGAGGGAAGAACAAGAAGCGGGGTGGCCGTCTTTCAGCCAGCTCATCCTCGATCTTTCCAAATTAGCCCTTGAAGGCTTCACCAATGTCTTTTCTTTCAACCCATTTCAAGTCCCCAAAAAAGGGCTCACCCCATTAAAAGATTCCTTAATCATGCCCGAAGATGAGCCCGGCCCATTACTCCAAAAGCACAGAACTTCAGGCCCGGTTTCCGAAACCCGTCAGGCCCATAATCCAAATGAGAAATACCCAGAAACAAAGCCCGTTAAGGTTAGATCATCGAAAGATCCTTTAAAGCATCGGGCTTCAAAGAGGGAAGAATACGCGGAGTTTTATGGGTCGAGTGGTGGTGGTGTGGGCCCACATGTTCGTTCAAAAAGTCAAAAGGAAAGGACGAAACATCGGGTTAGAGATAAGGATAAAGATAAAGATAAAGATAAAGCTGTGTACGGGGAACAGAAGAGTACGGTTGACTTGAAGCAGCAACCGGTCAACTTTGAGGAGGGGAAGTTTAGTTATATGAGGAATAAGTATGGTGATTCGTATCGTTATACTTAG	1680	43.81	MSPVLVALPTTHDVRQQLGGDVSLARWQMQVWWSARASNPLASPTRKLTGALPVANRAIETQLDLGFADRPQHSTPISFSLMRQMSSSLLYLIFSTLVSIYVLQFQAQAAPAAPVIKQLSSILKWTARSSSKSPLSDGNILQFEDGYLVETVVEGNQLGVVPYSIRVSQDGELFAVDAVNSNIVRITPPLSQYSRARLIAGSFQGYTGHVDGKPNDARFDHPKGVTMDDKGNVYVADTSNLAIRKIGETGVTTIAGGKSNVAGYRDGPSEDAQFSSDFDVIYVRPTCSLLVIDRGNAALRQISLNQEDCDLHSTSVSSTDIVLVIGAIAIGYVVSMIQQGYGSSYFSKVEKVESDSKPLQSKEKTLKITKNVESVREEQEAGWPSFSQLILDLSKLALEGFTNVFSFNPFQVPKKGLTPLKDSLIMPEDEPGPLLQKHRTSGPVSETRQAHNPNEKYPETKPVKVRSSKDPLKHRASKREEYAEFYGSSGGGVGPHVRSKSQKERTKHRVRDKDKDKDKDKAVYGEQKSTVDLKQQPVNFEEGKFSYMRNKYGDSYRYT	559

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Laca7g02827	559	Pfam	NHL repeat	219	245	IPR001258	GO:0005515(InterPro)
	Laca7g02827	559	SUPERFAMILY	NHL repeat	159	301	-	-
	Laca7g02827	559	Gene3D	-	116	304	IPR011042	-
	Laca7g02827	559	PANTHER	-	103	556	-	-
	Laca7g02827	559	MobiDBLite	consensus disorder prediction	507	527	-	-
	Laca7g02827	559	MobiDBLite	consensus disorder prediction	452	482	-	-
	Laca7g02827	559	MobiDBLite	consensus disorder prediction	423	530	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Laca7g02827	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Laca	Laca-Chr3:109266930	Laca7g02827	Laca-Chr7:135372928	dispersed
	Laca	Laca-Chr7:135372928	Laca8g04481	Laca-Chr8:223727911	transposed