Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02845 | ATGGCCTCTCCCCATTGCATCTATACAACTTCCCTTCTACTTTTGCTCAGCTTTCAACTATTTTCCACCATTTCCGAAGCTGTTGTGCCAGCTTCAGACACCTTCAGTTACGTAAACGAAGGTGTTTTCGGAGATTATATCGTAGAGTACGATGCAAATTATCGTTTTCTTCCTCCCTTTTCTAACCCATTCCAGCTTTGTTTCTACAACACCACCCCTAACGCATACACTCTAGCTCTACGTATGGGTACAGTCCGATCGGAGGCGCTTATGCGTTGGGTTTGGGAAGCCAACCGAGGCAACCCAGTTCGTGAAAACGCTACCCTCACCTTCGGTACAGATGGAAACCTTGTCTTAGCAGATGATGATGGCCGGATTGCTTGGCAAACCAACACCGCCAATAAGGGTGTCGTCGGTTTTCAGTTGCTCCCCACCGGTAACATGGTTCTTCATGATGGCAAGGGTAATTTCATATGGCAAAGCTTCGACTCCCCAACTGATACTCTCTTAATCGGTCAATCTCTTCGAGCTGGTGGTGTCAGTAAGCTGGTGAGCCGGGCTTCCGCCGAGAACAACACCGATGGACCATATAGCTTGGTGATGGAGCCTAACATGCTAGCCTTGTATTACAAGAGCCCTAATTCACCTCGCCCAATGCTTTATTGGTCCTTATTCGTTGACAGAGTTAGTGTGCTCAATCTAACTCTTACTTCAGATCCAGCTACAACTGAGGGTTTTCTCTATTACTTCGAGTTTCTTTACTTTACGACAAACTCCCAGGCTGCTTCGGATGTCGACTTGACCTACGCCCACACACGATACAACAACACGTTATCATATCTTCGAGTAGGGATGGATGGGAACCTTAGATTCTTCACGTATAATCCAAACGTGCAAGTCTACGCTTGGGATGTGGCTTACGAGTTTATGGGCAGAGATTCCTTAGAAAGTGAGTGTCAGTTGCCGGAACGATGTGGGAAGTTTGGGCTATGTGAGAATAGTCAATGTGTCGCATGCCCAACACCAAACGGACTAAGTGGGTGGAGCACAGATTGTGAGGCAAAGAAGGTACACGAGGGGAGATGGTGGAACGAAGCAAAGTGA | 1104 | 47.37 | MASPHCIYTTSLLLLLSFQLFSTISEAVVPASDTFSYVNEGVFGDYIVEYDANYRFLPPFSNPFQLCFYNTTPNAYTLALRMGTVRSEALMRWVWEANRGNPVRENATLTFGTDGNLVLADDDGRIAWQTNTANKGVVGFQLLPTGNMVLHDGKGNFIWQSFDSPTDTLLIGQSLRAGGVSKLVSRASAENNTDGPYSLVMEPNMLALYYKSPNSPRPMLYWSLFVDRVSVLNLTLTSDPATTEGFLYYFEFLYFTTNSQAASDVDLTYAHTRYNNTLSYLRVGMDGNLRFFTYNPNVQVYAWDVAYEFMGRDSLESECQLPERCGKFGLCENSQCVACPTPNGLSGWSTDCEAKKVHEGRWWNEAK | 367 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02845 | 367 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 58 | 353 | IPR051343 | - | |
| Laca7g02845 | 367 | CDD | B-lectin | 48 | 165 | IPR001480 | - | |
| Laca7g02845 | 367 | SMART | blect-4 | 48 | 165 | IPR001480 | - | |
| Laca7g02845 | 367 | Gene3D | - | 31 | 163 | IPR036426 | - | |
| Laca7g02845 | 367 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 73 | 214 | IPR036426 | - | |
| Laca7g02845 | 367 | Pfam | D-mannose binding lectin | 94 | 177 | IPR001480 | - | |
| Laca7g02845 | 367 | Pfam | S-locus glycoprotein domain | 256 | 344 | IPR000858 | GO:0048544(InterPro) | |
| Laca7g02845 | 367 | ProSiteProfiles | Bulb-type lectin domain profile. | 32 | 163 | IPR001480 | - | |
| Laca7g02845 | 367 | FunFam | Os04g0303100 protein | 84 | 218 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02845 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:136056948 | Laca8g00971 | Laca-Chr8:29510273 | dispersed | |
| Laca | Laca-Chr7:136056948 | Laca7g02846 | Laca-Chr7:136093240 | tandem |