Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02849 | ATGGCGGCATCGGCTGAACGCGAGAATTTCATCTATGTTGCCAAGCTCGCCGAGCAAGCTGAACGCTATGATGAAATGGTGGACGCGATGAAGAAGGTAGCAAAGTTGGATATCGAATTGACTGTTGAAGAGAGGAATCTGCTGTCAGTTGGATACAAGAATGTGGTGGGATCACGAAGGGCATCATGGAGGATTTTATCTTCAATTGAGCAAAAAGAGGAATCCAGAGGCAATGAAGTGAATGTTAAAAGGATTAAGGAATACAGACAGAAGGTGGAAACAGAGCTTTCCAACATCTGTGGTGATATCATGACTGTGATTGATGAGCATCTCATTCCATCTTCATCTGCTGGAGAATCCACTGTTTTCTACTACAAAATGAAAGGAGACTATTATAGGTATCTTGCAGAGTTCAAGTTTGGTAATGATAAAAAAGAGGCAGCTGATCAGTCACTGAAGGCTTATCAATTGGCATCTACTGCTGCAGAGGATTTATCTCCTACTCATCCAATCCGATTGGGGTTGGCTTTGAACTTCTCTGTTTTCTATTATGAGATTATGAATTCTCCCGAAAGAGCCTGCCACCTGGCGAAACAAGCATTTGATGAAGCTATCTCAGAGCTTGACTCCTTGAGTGAGGAATCATACAAAGATAGCACTTTAATTATGCAGCTTCTGAGGGACAATCTCACTTTGTGGACTTCTGATATTCCAGAAGATGGAGATGACCAAAAGATGGAGATCACAAAATCTGGTGCAGAAGATGCTGAGTAA | 774 | 42.12 | MAASAERENFIYVAKLAEQAERYDEMVDAMKKVAKLDIELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEESRGNEVNVKRIKEYRQKVETELSNICGDIMTVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKFGNDKKEAADQSLKAYQLASTAAEDLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDQKMEITKSGAEDAE | 257 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02849 | 257 | SUPERFAMILY | 14-3-3 protein | 6 | 236 | IPR036815 | - | |
| Laca7g02849 | 257 | MobiDBLite | consensus disorder prediction | 236 | 257 | - | - | |
| Laca7g02849 | 257 | FunFam | 14-3-3 protein epsilon | 2 | 247 | - | - | |
| Laca7g02849 | 257 | PIRSF | 14-3-3 | 1 | 247 | IPR000308 | - | |
| Laca7g02849 | 257 | Gene3D | - | 1 | 249 | IPR036815 | - | |
| Laca7g02849 | 257 | Coils | Coil | 194 | 214 | - | - | |
| Laca7g02849 | 257 | ProSitePatterns | 14-3-3 proteins signature 2. | 216 | 235 | IPR023409 | - | |
| Laca7g02849 | 257 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Laca7g02849 | 257 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Laca7g02849 | 257 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Laca7g02849 | 257 | PRINTS | 14-3-3 protein zeta signature | 153 | 179 | IPR000308 | - | |
| Laca7g02849 | 257 | PRINTS | 14-3-3 protein zeta signature | 207 | 236 | IPR000308 | - | |
| Laca7g02849 | 257 | PRINTS | 14-3-3 protein zeta signature | 180 | 206 | IPR000308 | - | |
| Laca7g02849 | 257 | PANTHER | 14-3-3 PROTEIN | 6 | 239 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Laca7g02849 | 257 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Laca7g02849 | 257 | MobiDBLite | consensus disorder prediction | 238 | 257 | - | - | |
| Laca7g02849 | 257 | SMART | 1433-4 | 7 | 247 | IPR023410 | - | |
| Laca7g02849 | 257 | Pfam | 14-3-3 protein | 14 | 234 | IPR023410 | - | |
| Laca7g02849 | 257 | Coils | Coil | 13 | 33 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02849 | K06630 | 14-3-3 protein epsilon |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 116410 | Laca7g02849 | Laca9g03196 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:136361485 | Laca8g01418 | Laca-Chr8:49219939 | dispersed | |
| Laca | Laca-Chr7:136361485 | Laca9g03196 | Laca-Chr9:130600603 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Lacanog03279 | . | 2 | 240 | 14-3-3 family | AT1G34760 | 73.333 | 2.87e-132 | 373.0 | |
| Laca1g00116 | ACH | 3 | 259 | 14-3-3 family | AT1G78300 | 88.716 | 8.05e-168 | 462.0 | |
| Laca2g01668 | ACH | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 1.56e-163 | 451.0 | |
| Laca3g01631 | ACH | 6 | 264 | 14-3-3 family | AT1G26480 | 81.081 | 5.14e-158 | 438.0 | |
| Laca4g00295 | ACH | 6 | 256 | 14-3-3 family | AT1G26480 | 84.064 | 1.55e-160 | 444.0 | |
| Laca4g03961 | ACH | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 9.02e-164 | 452.0 | |
| Laca4g04234 | . | 3 | 259 | 14-3-3 family | AT3G02520 | 88.327 | 1.06e-164 | 457.0 | |
| Laca6g02795 | ACH | 7 | 266 | 14-3-3 family | AT1G35160 | 84.733 | 6.26e-165 | 455.0 | |
| Laca7g02254 | . | 72 | 227 | 14-3-3 family | AT1G26480 | 50.641 | 2.48e-45 | 159.0 | |
| Laca7g02849 | ACH | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 6.77e-150 | 417.0 | |
| Laca8g01418 | ACH | 6 | 256 | 14-3-3 family | AT1G26480 | 85.714 | 1.29e-162 | 449.0 | |
| Laca9g02460 | ACH | 7 | 266 | 14-3-3 family | AT1G35160 | 83.525 | 5.75e-163 | 450.0 | |
| Laca9g02505 | . | 1 | 247 | 14-3-3 family | AT5G65430 | 83.806 | 5.36e-156 | 431.0 | |
| Laca9g03196 | ACH | 1 | 263 | 14-3-3 family | AT2G42590 | 77.186 | 2.46e-152 | 423.0 |