Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02853 | ATGGCCGACGAGAAAGAGGTGAAGGAAGTGGTTGGAGAGAAGACCGATGATAAGAAAAAGAACATGAGCAAGAAGAAGAGCGGAATTCTCTCTCGGATTTGGAATACAGTGTTTAGGTCGCGAAGCGATGATTTTGAGAAGAGACTGCAGTATATATCTAAAGAAGAGGCTACGCTTCTATCGCGAATGAAGAGACGAGCTCTGAGATGGAGGCGAACAGCCAGGAACATAATCATCTTCTCTGTTATCCTTGAGTTTGTTGCAATTGGTTATGCTATCATGACAACAAGAACAGTAAACATGGACTGGAGAACGAGATCATTGCGAGTCCTACCAATGTTTCTTCTTCCTGCCATATCATTCGCTCTGCATTATGGACTTTTGAGCTTCACGAGATTCGGTGATCGAAGGGATCAGAAAGCACTAGAGAGGCTTCGCTCTGAAAGGCAAGCAAAAATCGATGAACTTAAAGAAAGGACTAATTACTACATTACTCAACAACTCATTCAGAAATATGATCCTGATCCAGCAGCAAAAGCAGCAGCTGCATCTGTTCTCGCATCAAAACTGGGTGCAGATTCAGGCCTGAAAATGTTTCTTGGAAACGAATCACAACCAAATCCGTATACCACAGGGAAGAACAACGAGGTTGAGGTGCATCAAACTACTGGTCTCAGGAAACGAAATCAATCAAACCTTAAATCTCAAGGAAGCAATACAGTAAATCAACAATCAGAAACAGAAATCGGAGATTTGGTTTCTGAGAGATCTTCACATGGTGATCTTGTTGTTGATCATCATGATCCTGCAACTTTAGGTGGTCAAGATGGTGGTTGGATTGCTCGAATTGCTGCAATGCTTGTGGGAGAAGACCCAACTCAATCATATGCACTTATATGCGGGAATTGCCATATGCATAATGGACTTGTGAGAAAGGAGGAATTCCCTTTTATTACTTACTATTGTCCCCATTGTCATGCGTTGAATAAACCAAAGAATTCAGGAGTTTCTTCTGAAGCAACCATGTCCCCTGTTTTGGGACCTTCAAGAACAGTAAGTGCAGATGTTAAATTGATTGAAGAAAATAATGAAAAGGTAGTACCTGGTGAGATTATCAGCCACGTGGCAGGTGATGTGGAGGAGAAAGAAGTGAGTGAGAAAATAGTGGGAGATGAGTGA | 1179 | 41.98 | MADEKEVKEVVGEKTDDKKKNMSKKKSGILSRIWNTVFRSRSDDFEKRLQYISKEEATLLSRMKRRALRWRRTARNIIIFSVILEFVAIGYAIMTTRTVNMDWRTRSLRVLPMFLLPAISFALHYGLLSFTRFGDRRDQKALERLRSERQAKIDELKERTNYYITQQLIQKYDPDPAAKAAAASVLASKLGADSGLKMFLGNESQPNPYTTGKNNEVEVHQTTGLRKRNQSNLKSQGSNTVNQQSETEIGDLVSERSSHGDLVVDHHDPATLGGQDGGWIARIAAMLVGEDPTQSYALICGNCHMHNGLVRKEEFPFITYYCPHCHALNKPKNSGVSSEATMSPVLGPSRTVSADVKLIEENNEKVVPGEIISHVAGDVEEKEVSEKIVGDE | 392 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02853 | 392 | PANTHER | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK | 23 | 341 | IPR040115 | GO:0071782(PANTHER)|GO:0071786(PANTHER)|GO:0071786(InterPro) | |
| Laca7g02853 | 392 | Pfam | Predicted integral membrane zinc-ribbon metal-binding protein | 279 | 329 | IPR019273 | - | |
| Laca7g02853 | 392 | Coils | Coil | 139 | 159 | - | - | |
| Laca7g02853 | 392 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02853 | K23292 | endoplasmic reticulum junction formation protein lunapark |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 115827 | Laca5g02921 | Laca7g02853 | |
| 116413 | Laca7g02853 | Laca9g03183 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr5:184584569 | Laca7g02853 | Laca-Chr7:136809645 | wgd | |
| Laca | Laca-Chr7:136809645 | Laca9g03183 | Laca-Chr9:130201778 | wgd |