AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02886 ATGTCTCTGTATTCGCGCACAATTACAAACATGTCAATGCTGCTGAGTTCTTTTCGTAGTCATTTCTTCAAACAGTTGGCGTGCACTTCCTTCTCGTCGATTCGTGGCACAGCAAGTCTCGCTTCTGGTTCCAGTTCTATATTATTTGGTTCAACCAAAGATTACCCATCAAGAAATTTGACAGATTTCTTGAATTTGAGTTCAGTTCATGCAGCATTCTCTACATCTTCTTCTAATTCTGAAAGTCCGACAACTGGTTCGTACCTCTCTGTCGACATACAATGTCGTCAAGATGTTGCAGATATGCTTTCGGAAGCTCTTTTATGTTTTGGTGCTACTTCCACAACCATGGTCGAGCCAGACACCTGCGACTCTAATGACGAGGTTTCCATTGGTTCGATCTTCTTGGTATCTCAAGACGTCCATCAAAGTATCACATTCGCAGCTAATTCAATAGGTTTGAAAGAAACACCCGTTTACAAAGTCACAACAGGCTACCAATCTGATTGGATCGAAAATTCTCGAGAATCATTCCATCCCATTGAAGTTAAAGAAGGAGTTTGGATTATACCCGAGTGGATAACACCCCCAGATCTTCAAGCTACAATCATAACTCTAAACCCTGGCTTAGCATTTGGAACAGGAGATCACCCTACTACAAAATTATGTCTATTGCTATTACATGATTTAATCAAAGGGGGAGAAACAGTTCTTGATTATGGCACAGGTTCTGGGATTCTTGCGATTGCAGCATTAAAGTTTGGTGCAGCGAAATCAGTTGGATTTGATATAGATCCTCAAGCAATAACAGCCGCACATTATAACGCTGTTCTGAACAACATAGGACCCAAGAATTTGGAATTGCGGCTTGTTCCTAGTAATCCTAACGACACCGGTTCTTCAAGAGAGGAATGGAATTGGGCTATGAAGAGTGAAGAGGAATTAGATGGGAATGGAATCATCGATGAGAAAGAGAAATACGATGTCGTTATTGGGAACATTCTTTTGAACCCTTTGTTAGATTTGGCAGATGAGATTGTTTCTTATGCGAAGCCTGGTGGTGTGGTTGGTCTTTCTGGGATTATCTTGGAACAGGTATCAACTGTTGTAGATCGATACTCGAATCTTCTAGAAGGTGTGACTGTCTCAAAGATTGATGACTGGGCTTGCATACGTGGCACAAAGAGAAATGCTTAG 1197 41.35 MSLYSRTITNMSMLLSSFRSHFFKQLACTSFSSIRGTASLASGSSSILFGSTKDYPSRNLTDFLNLSSVHAAFSTSSSNSESPTTGSYLSVDIQCRQDVADMLSEALLCFGATSTTMVEPDTCDSNDEVSIGSIFLVSQDVHQSITFAANSIGLKETPVYKVTTGYQSDWIENSRESFHPIEVKEGVWIIPEWITPPDLQATIITLNPGLAFGTGDHPTTKLCLLLLHDLIKGGETVLDYGTGSGILAIAALKFGAAKSVGFDIDPQAITAAHYNAVLNNIGPKNLELRLVPSNPNDTGSSREEWNWAMKSEEELDGNGIIDEKEKYDVVIGNILLNPLLDLADEIVSYAKPGGVVGLSGIILEQVSTVVDRYSNLLEGVTVSKIDDWACIRGTKRNA 398
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02886 398 CDD AdoMet-MTases 236 356 - -
Laca7g02886 398 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 88 396 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Laca7g02886 398 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 158 391 IPR029063 -
Laca7g02886 398 Pfam Ribosomal protein L11 methyltransferase (PrmA) 88 395 - -
Laca7g02886 398 Hamap Ribosomal protein L11 methyltransferase [prmA]. 86 395 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Laca7g02886 398 Gene3D Vaccinia Virus protein VP39 177 398 IPR029063 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02886 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]