Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02886 | ATGTCTCTGTATTCGCGCACAATTACAAACATGTCAATGCTGCTGAGTTCTTTTCGTAGTCATTTCTTCAAACAGTTGGCGTGCACTTCCTTCTCGTCGATTCGTGGCACAGCAAGTCTCGCTTCTGGTTCCAGTTCTATATTATTTGGTTCAACCAAAGATTACCCATCAAGAAATTTGACAGATTTCTTGAATTTGAGTTCAGTTCATGCAGCATTCTCTACATCTTCTTCTAATTCTGAAAGTCCGACAACTGGTTCGTACCTCTCTGTCGACATACAATGTCGTCAAGATGTTGCAGATATGCTTTCGGAAGCTCTTTTATGTTTTGGTGCTACTTCCACAACCATGGTCGAGCCAGACACCTGCGACTCTAATGACGAGGTTTCCATTGGTTCGATCTTCTTGGTATCTCAAGACGTCCATCAAAGTATCACATTCGCAGCTAATTCAATAGGTTTGAAAGAAACACCCGTTTACAAAGTCACAACAGGCTACCAATCTGATTGGATCGAAAATTCTCGAGAATCATTCCATCCCATTGAAGTTAAAGAAGGAGTTTGGATTATACCCGAGTGGATAACACCCCCAGATCTTCAAGCTACAATCATAACTCTAAACCCTGGCTTAGCATTTGGAACAGGAGATCACCCTACTACAAAATTATGTCTATTGCTATTACATGATTTAATCAAAGGGGGAGAAACAGTTCTTGATTATGGCACAGGTTCTGGGATTCTTGCGATTGCAGCATTAAAGTTTGGTGCAGCGAAATCAGTTGGATTTGATATAGATCCTCAAGCAATAACAGCCGCACATTATAACGCTGTTCTGAACAACATAGGACCCAAGAATTTGGAATTGCGGCTTGTTCCTAGTAATCCTAACGACACCGGTTCTTCAAGAGAGGAATGGAATTGGGCTATGAAGAGTGAAGAGGAATTAGATGGGAATGGAATCATCGATGAGAAAGAGAAATACGATGTCGTTATTGGGAACATTCTTTTGAACCCTTTGTTAGATTTGGCAGATGAGATTGTTTCTTATGCGAAGCCTGGTGGTGTGGTTGGTCTTTCTGGGATTATCTTGGAACAGGTATCAACTGTTGTAGATCGATACTCGAATCTTCTAGAAGGTGTGACTGTCTCAAAGATTGATGACTGGGCTTGCATACGTGGCACAAAGAGAAATGCTTAG | 1197 | 41.35 | MSLYSRTITNMSMLLSSFRSHFFKQLACTSFSSIRGTASLASGSSSILFGSTKDYPSRNLTDFLNLSSVHAAFSTSSSNSESPTTGSYLSVDIQCRQDVADMLSEALLCFGATSTTMVEPDTCDSNDEVSIGSIFLVSQDVHQSITFAANSIGLKETPVYKVTTGYQSDWIENSRESFHPIEVKEGVWIIPEWITPPDLQATIITLNPGLAFGTGDHPTTKLCLLLLHDLIKGGETVLDYGTGSGILAIAALKFGAAKSVGFDIDPQAITAAHYNAVLNNIGPKNLELRLVPSNPNDTGSSREEWNWAMKSEEELDGNGIIDEKEKYDVVIGNILLNPLLDLADEIVSYAKPGGVVGLSGIILEQVSTVVDRYSNLLEGVTVSKIDDWACIRGTKRNA | 398 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02886 | 398 | CDD | AdoMet-MTases | 236 | 356 | - | - | |
| Laca7g02886 | 398 | PANTHER | ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE | 88 | 396 | IPR050078 | GO:0005739(PANTHER)|GO:0008276(PANTHER) | |
| Laca7g02886 | 398 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 158 | 391 | IPR029063 | - | |
| Laca7g02886 | 398 | Pfam | Ribosomal protein L11 methyltransferase (PrmA) | 88 | 395 | - | - | |
| Laca7g02886 | 398 | Hamap | Ribosomal protein L11 methyltransferase [prmA]. | 86 | 395 | IPR004498 | GO:0006479(InterPro)|GO:0008276(InterPro) | |
| Laca7g02886 | 398 | Gene3D | Vaccinia Virus protein VP39 | 177 | 398 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02886 | K02687 | ribosomal protein L11 methyltransferase [EC:2.1.1.-] |