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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02911 ATGGCTAATCACATTAGGGTTGTCATCATCATGTTGGCAATCACTTTCCCCCGTTTTGCAACATCCAAACCTATAATCTTGTCGTCCCAACCCCAATGGACAGTATTGAACCGATTGTCAGGCTCTCATCGACGACTTGTAGGGGACACCATTGACATTAGGGAAGAGATGATGATGGAATCCGAAAGTGCACGAAGAATCCTAGCTGGAAGAGGGTATATCAGCTATAACGCGATGCAGAAGAACAATGTTCCATGCAACCAACGTGGTCAGTCTTATTATGATTGTAATAGTAGAGGTCAGGCTAATCCGTATTCTCGAGGATGCAATGTTATCACTAGGTGTGGTGGTCGTTGA 357 44.54 MANHIRVVIIMLAITFPRFATSKPIILSSQPQWTVLNRLSGSHRRLVGDTIDIREEMMMESESARRILAGRGYISYNAMQKNNVPCNQRGQSYYDCNSRGQANPYSRGCNVITRCGGR 118
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02911 118 Pfam Rapid ALkalinization Factor (RALF) 55 116 IPR008801 -
Laca7g02911 118 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 33 115 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02911 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr6:60714205 Laca7g02911 Laca-Chr7:139088441 dispersed
Laca Laca-Chr7:139088441 Laca1g02172 Laca-Chr1:59079343 transposed