AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02914 ATGGAGATCGTATCAAGACAACAACACGAAAGAGAAAACCCATCACCGACGAATTCTCCGTCCAGCCATGGAAGCAGTAGCAACAGCAATGGACATACCACCGGCGGTGGCGCCGTCCAAACACCACCACTAACTCCAAGACCCGTTTCAAGATCCGAACCAAATCCATACCCAACAACCTTCGTCCAAGCAGACACAACTTCATTCAAACAAGTAGTACAGATGCTAACTGGATCATCAAAACCGACCCACCAACCAGATCCGGCGCCGACGAGGACATCCATACCGCCGATCAAAACCGGTCAACAGAAGAAACAAGGATTCAAGCTCTACGAGCGTAGGAACAGTCTGAAAAACGGGCTGATGATCAACGCATCGGTGCCGAAGCTCCATGGTCATGGGTTATCGCCGCGACTCCATGAAATGCTCTCTCCAAGCATTCTTGATTTTCCGGCGCTTGTTCTTAGTCCGGTGACGCCATTGATCGAAGACCGGTTGAATAAATCGTCACCGTCGATTGTGGACTCTTCGGAAGAAGAGAGGGTAATTGCGGCAAAAGGATTTTATTTGCATCCGTCGCCTAGGGCGGCGACGCCACATGCGACGACGGAGCCACAGCTGCTGCCTCTTTTTCCGTTGACCTCGCCGCGGGTATCGGAGTCGTCGATTTAG 672 51.79 MEIVSRQQHERENPSPTNSPSSHGSSSNSNGHTTGGGAVQTPPLTPRPVSRSEPNPYPTTFVQADTTSFKQVVQMLTGSSKPTHQPDPAPTRTSIPPIKTGQQKKQGFKLYERRNSLKNGLMINASVPKLHGHGLSPRLHEMLSPSILDFPALVLSPVTPLIEDRLNKSSPSIVDSSEEERVIAAKGFYLHPSPRAATPHATTEPQLLPLFPLTSPRVSESSI 223
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02914 223 MobiDBLite consensus disorder prediction 54 88 - -
Laca7g02914 223 Pfam VQ motif 56 81 IPR008889 -
Laca7g02914 223 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 25 219 IPR039611 -
Laca7g02914 223 MobiDBLite consensus disorder prediction 1 105 - -
Laca7g02914 223 MobiDBLite consensus disorder prediction 10 40 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02914 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
116418 Laca7g02914 Laca9g03149
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr9:128963502 Laca7g02914 Laca-Chr7:139202832 transposed
Laca Laca-Chr7:17510002 Laca7g02914 Laca-Chr7:139202832 wgd