Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Laca7g02924	ATGAGAGGACCGGTGATCGGAAAGTACCCATCAAGCGACGGAAATGGTGAAGTCGGCGCCGGAAACGGAATCATAAAGCACAATCGGAAATGCAGAGATATTGTGTTTCTTGTTTTCTTCATAGCTTTCTGGATCTCCATGATTGTTAACTCCAGCTTCGGTTTCAACCAAGGAAACCCATTAAGGTTAAATTTCGGTTTGGATTATAAAGGAAATGTATGTGGAGGAAAACATTCCGATTTTGACCTCCGTGAGTTGGAACTCAAATATTGGGTTAACCCTAATCAAGTTTACCAAAGTGGCATGAAGAACAGCGGGGTAAAACTGTCAAATGCTCGAACCATATGCTTATTAGATTGTCCAATACCCTCGGAAGATTCTTTAAATTGGGTTTGTGATTATCCAGAGGGAGATATTCGTCTTTCTTTAGATGATTGGATCGATATGAATTATGATTATTTTGCCGATCTTACCCCTGAACTAAGAAACACTTCTCTTCAACTTCAAGGCCCTTGTTACCCTGTCATTTTTCCAAGCGTAAACGTTTATTGGAGTTGCCAGTTTATTGATCGACCATCAAATGTTTCTTTGACTAATTGGAAACGAATGAATGGAGTTACAATCAATGATGATATGATCATAGATAAATCTATTCATAACTCCATTAATGCACGATCTTCTGTATTGAAGAGATATGTTGCGGATGTTGGAAAATCATGGCCCGTGTTGATTGTTTGTGGAGGACTTTTGCCTTTATTTTTATCGCTTTTGTGGCTTTTAATGATCCGACATTTTGTGACCGGAATGCCCTGGGTGACCGTTTTTCTCTTTAACGGCCTCATCATATCTGTCACAATGTTCTACTACATGAAAGCTGGATGGATTGGGAACGATGCCATTTCGCCTATCATCGGCGAACACGATCCATACTATCATGTCACTTCAAGGGAGCAACATCATATGCGAGCAGCCGCTTTTCTCATGACATGTGTCATGATCGTATCCGTTTTATCATCAATCGCCATTGTTCGCCGGATTCTCATGGCCACATCAGTACTCAAGGTGGCAGCAAAGGTGATCGGAGAAGTTCACGCGTTGATAATTTTTCCGGTGATCCCGTACCTAATTCTGGCGGTGTTCTACATGATCTGGGTGTCGGCGGCTCTCCACCTTTTCAGCTCCGGCGAGATAGTCCGCAATGATTGCAACACGAATTGTTGTGCATACGATTTGAAAGCCAAAAGGGTGAGTTGCGATGATTGTTGTGGGTATAGCATTCATTACACCAATCATATTGCAGCTTCGATTCTCTTCCACTTGTTTGGATGCTATTGGGCCACTCAATTTCTCATCGCCTCTTCTTCCACTGTCATTGCTGGCTCCGTGGCTTCTTACTATTGGGCTCGTGGAGAATCATCGACAACGATTCCGTTTCTTCCGGTTTTCTCATCGATGAAGCTACTCACGCGATACAGCCTTGGCTCAATAGCAATCGGTTCCTTAATCGTGTCTTTTATCGAGTCGACTCGGTTCATACTCGAAGCCATTCGTAGGAGACTCAAAATCGCTGACATCATGCCTGAAAACTTCATCAAAAGAATGATGTTCCACACTTCTCGTTTTTGCTTAAAGGGCATTGAATTAACCATAAAATCAGTCAACCGAAACGCATACATTATGATTGCAATAACGGGAAAAGGATTCTTCAAAGCTTCAGAAATAGCAACAAATTTGATAATAAGTAACATTTTGAGGATTGGAAGAGTGAATGTGATTGGAGATGTTATTTTATTTCTTGGAAAACTTTGTGTGAGTCTTGCTAGTGCGCTTTTTGCGTTTCTTATGTTGGACACTCATAAGTATAAATCGTCTCACAACAAGATCACATCCCCGTTGTTTCCTGTAATGGTTTGTTGGGGATTAGGGTATGTGGTGGCGACACTGTTTTTTGGGGTGGTGGAAATGTCGATAGATACGATTATTTTATCGTATTGTCAAGATGCAGAGGAACATCAAGGGACAGCACATTATGCGCCTCCACTTTTGATTGAGACTTTTGAGGAAGATAATGAGATACAAGCTTCACAGACAAAACCTTTGAAAACCCTTGATCGAAAGAACCCTACATTTGAAGACGCGATGGCGCCTTGGAGGATACGTGCTTTGCTCGTAGATATGTTTACAAAGTTCCCTGGAAGAAAGTACATCAAAGGCAAGCAAAATTACGTTGATTTACTAGATATTGACACCTTTTCCATTCACGACATTGACGAGATGATGGAGGAACTTGGGCATATTGATTCAGACCAGACACTACTCTATTATCATTTCCTGAGACCATTTGGCGATTTGGATTTTGGGTTATTTGCTTTGGGTTCAGATCAGGATGTTCATCATCTGGAGCCACCAGCTTGCTCCAAACAATTGTTCTTGGAGTGGAATGACTCTCCAATTGAGCATGAGAGTGTTCCAGACCTAACAGAAGTTGAGAATGATAGTCATTTGGACAAAGAACCATCTTTGGTCGACCATATTGATTTTGACATGAATATAGAGAATGAGGATGATTATGATGGTAGTGGAAACAACAATGGCAGTGGAAGTGATGAGTTTGATGATGATAGTGAGAGTTAA	2634	41.27	MRGPVIGKYPSSDGNGEVGAGNGIIKHNRKCRDIVFLVFFIAFWISMIVNSSFGFNQGNPLRLNFGLDYKGNVCGGKHSDFDLRELELKYWVNPNQVYQSGMKNSGVKLSNARTICLLDCPIPSEDSLNWVCDYPEGDIRLSLDDWIDMNYDYFADLTPELRNTSLQLQGPCYPVIFPSVNVYWSCQFIDRPSNVSLTNWKRMNGVTINDDMIIDKSIHNSINARSSVLKRYVADVGKSWPVLIVCGGLLPLFLSLLWLLMIRHFVTGMPWVTVFLFNGLIISVTMFYYMKAGWIGNDAISPIIGEHDPYYHVTSREQHHMRAAAFLMTCVMIVSVLSSIAIVRRILMATSVLKVAAKVIGEVHALIIFPVIPYLILAVFYMIWVSAALHLFSSGEIVRNDCNTNCCAYDLKAKRVSCDDCCGYSIHYTNHIAASILFHLFGCYWATQFLIASSSTVIAGSVASYYWARGESSTTIPFLPVFSSMKLLTRYSLGSIAIGSLIVSFIESTRFILEAIRRRLKIADIMPENFIKRMMFHTSRFCLKGIELTIKSVNRNAYIMIAITGKGFFKASEIATNLIISNILRIGRVNVIGDVILFLGKLCVSLASALFAFLMLDTHKYKSSHNKITSPLFPVMVCWGLGYVVATLFFGVVEMSIDTIILSYCQDAEEHQGTAHYAPPLLIETFEEDNEIQASQTKPLKTLDRKNPTFEDAMAPWRIRALLVDMFTKFPGRKYIKGKQNYVDLLDIDTFSIHDIDEMMEELGHIDSDQTLLYYHFLRPFGDLDFGLFALGSDQDVHHLEPPACSKQLFLEWNDSPIEHESVPDLTEVENDSHLDKEPSLVDHIDFDMNIENEDDYDGSGNNNGSGSDEFDDDSES	877

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Laca7g02924	877	PANTHER	CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)	23	690	IPR007603	GO:0022857(InterPro)\|GO:0055085(InterPro)
	Laca7g02924	877	MobiDBLite	consensus disorder prediction	828	848	-	-
	Laca7g02924	877	Pfam	Plasma-membrane choline transporter	327	669	IPR007603	GO:0022857(InterPro)\|GO:0055085(InterPro)
	Laca7g02924	877	MobiDBLite	consensus disorder prediction	828	877	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Laca7g02924	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Laca	Laca-Chr7:16912063	Laca7g02924	Laca-Chr7:139615236	dispersed
	Laca	Laca-Chr7:139615236	Laca8g04504	Laca-Chr8:226491471	dispersed
	Laca	Laca-Chr7:139615236	Laca1g00438	Laca-Chr1:11213456	transposed
	Laca	Laca-Chr7:139615236	Laca6g00851	Laca-Chr6:28538584	transposed
	Laca	Laca-Chr7:139615236	Laca9g02115	Laca-Chr9:61026022	transposed