AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02954 ATGATCCATACTATACAAATTACAATTGGGTCAACATATGAATTATCACGAAAATACAAGTGTGAACATCATCTGCATGTAGGTCCCACTAAGATATACTTAAATACATATCGCGGAAGCCCACACTTTCCTCCATTTATTACCATCCCTCCACCACCCTCAATCTCACATATTTCCAACTATTTATACCCACATAACTCCGCCTCCACTCCACTACCACCGGCACCACAAACCGCCATGGGCTTCTCTCTTAAACTCGCCGTGGTTTCCGCCACTGTCTTGTCAACCGCTGTCATGCTCAAACTTGTAGCACCTGTCATTATGGAGCTGACAATCTCCGACCTTCCTTTCCTATGGACCTCCGTCATCTCTTGGCTCAAACCGCCGTATCTTTACGTCGTCATCAACTGTATCATCATCACCATCGTTGCTTCTTCACGCTTACAGTCCAAGCTCGATGCTTCTCCTTCTCCCTCGATGTCGCCAACTCTCCCTACTGCACTCCTACTCTCAACTGAGCCCATCAAGGTTGAGCTACCCCCACTGGAACCACCGTTCCACGGTGGTCAATTGGCGAATGAACCCGTGAAGATCACCGCCGCTAGTTACGGCGATAGTCCGATGTTTGTTCAAGCTCCGGAACCGGATTTTGGTATTCCTCAGTTTACTGATGAATACAAGGATGAAGATATGAAGGTAGCAACCGAAGCTTACGAAGAAATCACAAATAATACAATTAATAAGCATGTAATCTCGATGTCTTCCTGGACCCCGTCAAAAATAAAACAAGTAGATCTCACTTTTCCGGTGGAGAAACCACCAGCTTCCGCCAGATTCAGCCACCGGAAACTTGCGAAAGGCAGCGCCGAAGGTGGACGGGCGTTGGGGATTGCGAAGCCGAAGCGTCAGGACACATTGGAAACCACGTGGAAGACAATAACGGAGGGCCGGTCGGTGCCTTTGACGAGACACCTACGTAAATCTGACACGTGGGAGACACACCGCAACTCCGAGGACTCACCAATCGAGCATCACCCGGAAAGGATGACGAAGTCCGATACGTTTGACGTCAACCGCGGAGGTGGTAGTAGTAGGAAACCACCGCCTATGCCGTCGAAGCTGAGTCGGTCGGGTGGGTCGGGGAGGCTGAGGAAGGATCCGTCGTTGGGGCAGGAGGAACTTAACCGGAAAGTGGAAGCATTCATTAAGAAATTCAATGAGGATATGAGATTACAGAGACAAGAATCCTTGAATCAGTACATGGAGATGATCAATCGTGGGGCACATTAA 1290 48.91 MIHTIQITIGSTYELSRKYKCEHHLHVGPTKIYLNTYRGSPHFPPFITIPPPPSISHISNYLYPHNSASTPLPPAPQTAMGFSLKLAVVSATVLSTAVMLKLVAPVIMELTISDLPFLWTSVISWLKPPYLYVVINCIIITIVASSRLQSKLDASPSPSMSPTLPTALLLSTEPIKVELPPLEPPFHGGQLANEPVKITAASYGDSPMFVQAPEPDFGIPQFTDEYKDEDMKVATEAYEEITNNTINKHVISMSSWTPSKIKQVDLTFPVEKPPASARFSHRKLAKGSAEGGRALGIAKPKRQDTLETTWKTITEGRSVPLTRHLRKSDTWETHRNSEDSPIEHHPERMTKSDTFDVNRGGGSSRKPPPMPSKLSRSGGSGRLRKDPSLGQEELNRKVEAFIKKFNEDMRLQRQESLNQYMEMINRGAH 429
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02954 429 MobiDBLite consensus disorder prediction 324 394 - -
Laca7g02954 429 MobiDBLite consensus disorder prediction 324 354 - -
Laca7g02954 429 PANTHER COTTON FIBER (DUF761) 106 427 - -
Laca7g02954 429 Pfam Domain of unknown function (DUF4408) 116 148 IPR025520 -
Laca7g02954 429 Pfam Cotton fibre expressed protein 391 426 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02954 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr4:60979796 Laca7g02954 Laca-Chr7:140941767 dispersed