AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02963 ATGGCAAGCAAAAGATGTTTGTTTTTTATCATTTTGGCAACAATTGTTGTTTCGGGTGCCATTACACAAGTGAAAGCTTATACATCAAGTTACTGCAGTCATGATTCTCGTTGCCCGGGTCAATATATCTCATGCCCTTCTGAATGCCCTGAAAGCAACTCCAACGACCCCAACACTAAAGTTTGTCGCATTGATTGCTATTCTCCAAAATGCAAGGCTCAATGCAAACATAACAAACCAGAGTGTGACACACCGGGATCTGCATGCTACGACCCACGCTTCATCGGAGGAGACAGCATCGTCTTTTACTTTCACGGCAAAGTCAACGAGCATTTCAGTTTGGTCTCCGATTCAAACCTCCAAATCAACGGACGATTCATCGGCCACCAACCCACCGGCAGAACCAGGCCCTTCACCTGGATCCAAGCCTTGGGTCTCCTTTTCAACTCACACAGTTTCTCCCTGGAAGCAACTAAATCCGCCACCTGGGACGGCGGCATCGACCACCTGAAATTCTCCTACGATGGTGAAGATGTTTTGTTAGCTCTTGGTGGATTATCATCATGGAAGTCGCCGGAGGGTGAAATCGAAGTGGAGAGAACTTCTGCCGTGAACAATGTGATGGTGAACATACCAGGAGTTGTGGAGATTTTGGCGAATGTGGTGCCGGTTACTGCGGAAGATGACAAGATCCACAGCTACAATGTGCCTTCTGATGACTGTTTTGCTCATTTGGAAGTGCAGTTTAAGTTTACCGGACTTTCCGATGGAGTTGAAGGGGTTTTGGGAAGGACATATCAGCCTGATTTTAAGAATCCGGCGAAGCCAGGGGTTGCTATGGCGGTTGTGGGAGGAGAAGACAAGTATAGAACGACGTCTTTGTTGTCTTCCGATTGTGCAAAATGCATTTACAATTCCAGTAATGTTGAAGAGAAAGAGAATAGTATGATTAAGGACAATGGAACTTTGGATTGTTCTACCAAGGGATTGTTACGTGGAAATGGGATTGTTTGCAAGAAATGA 1023 45.75 MASKRCLFFIILATIVVSGAITQVKAYTSSYCSHDSRCPGQYISCPSECPESNSNDPNTKVCRIDCYSPKCKAQCKHNKPECDTPGSACYDPRFIGGDSIVFYFHGKVNEHFSLVSDSNLQINGRFIGHQPTGRTRPFTWIQALGLLFNSHSFSLEATKSATWDGGIDHLKFSYDGEDVLLALGGLSSWKSPEGEIEVERTSAVNNVMVNIPGVVEILANVVPVTAEDDKIHSYNVPSDDCFAHLEVQFKFTGLSDGVEGVLGRTYQPDFKNPAKPGVAMAVVGGEDKYRTTSLLSSDCAKCIYNSSNVEEKENSMIKDNGTLDCSTKGLLRGNGIVCKK 340
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02963 340 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 27 340 - -
Laca7g02963 340 Pfam Root cap 248 304 IPR009646 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02963 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr7:141150504 Laca7g02963 Laca-Chr7:141191783 dispersed
Laca Laca-Chr7:141191783 Laca7g02965 Laca-Chr7:141216010 dispersed
Laca Laca-Chr7:141184947 Laca7g02963 Laca-Chr7:141191783 tandem
Laca Laca-Chr7:141191783 Laca7g02964 Laca-Chr7:141205358 tandem