AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g02965 ATGGCAAGCAAAAGATGTTTGTTTTTTATCATTTTGGCAACAATTGTTGTTTCGGGTGCCATTACACAAGTGAAAGCTTATACATCCAGTTACTGCAGTCATGACTCCCGTTGCCCGGGTCAATATATCTCATGCCCTTCTGAATGCCCTGAAAGCAGCTCCAACGACCCCAACACTAAAGTTTGTCGCATTGATTGCTATTCTCCAAAATGCAAGGCCCAATGCAAACACAACAAACCAGAGTGTGACACACCGGGATCTGCATGCTACGACCCACGCTTCATCGGAGGAGACAGCATCGTCTTCTACTTTCACGGCAAGGCCAACGAGCATTTTAGTTTGGTCTCCGATTCAAACCTCCAAATCAACGGACGATTCATCGGCCACCAACCCACCGGCAGAACCAGGCCCTTCACCTGGATCCAAGCCTTGGGTCTCCTTTTCAACTCACACAGTTTCTCCCTGGAAGCAACTAAATCCGCCACCTGGGACGGAGGAATCGACCACTTGAAATTCTCCTACGATGGAGAAGACGTTTCGTTAGCTCTTGGTGGGTTATCGTCGTGGAAGTCGCCGGAGGGTGAAATCGAAGTGGAGAGAACTTCTGAGGTGAACAGTGTGATGGTGAACATACCTGGAGTTGTGGAGATTTTGGTGAATGTGGTTCCGGTTACAGCGGAAGATGACAAGATCCACGGCTACAATGTGCCTTCTGATGACTGTTTTGCTCATTTGGAAGTGCAGTTTAAGTTTACCGGACTTTCCGATGGAGTTGAAGGGGTTTTGGGAAGGACATATCAGCCGGATTTTAAGAATCCGGCGAAGCCAGGGGTTGCTATGGCGGTTGTGGGAGGAGAAGACAAGTATAGAACGACGTCTTTGTTGTCTTCCGATTGTGCAAACTGCATTTACGATTCCAGTAATGTTGCAGAGAAAGAGAATAGTATGATTAAGGAGTATGGAACATTGGATTGTTCTGCGAAGGGATTATTCCGTGGAAATGGGATTGTTTGCAAGAAATGA 1023 47.12 MASKRCLFFIILATIVVSGAITQVKAYTSSYCSHDSRCPGQYISCPSECPESSSNDPNTKVCRIDCYSPKCKAQCKHNKPECDTPGSACYDPRFIGGDSIVFYFHGKANEHFSLVSDSNLQINGRFIGHQPTGRTRPFTWIQALGLLFNSHSFSLEATKSATWDGGIDHLKFSYDGEDVSLALGGLSSWKSPEGEIEVERTSEVNSVMVNIPGVVEILVNVVPVTAEDDKIHGYNVPSDDCFAHLEVQFKFTGLSDGVEGVLGRTYQPDFKNPAKPGVAMAVVGGEDKYRTTSLLSSDCANCIYDSSNVAEKENSMIKEYGTLDCSAKGLFRGNGIVCKK 340
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g02965 340 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 27 340 - -
Laca7g02965 340 Pfam Root cap 248 304 IPR009646 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g02965 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr6:45094216 Laca7g02965 Laca-Chr7:141216010 dispersed
Laca Laca-Chr6:45102863 Laca7g02965 Laca-Chr7:141216010 dispersed
Laca Laca-Chr7:141184947 Laca7g02965 Laca-Chr7:141216010 dispersed
Laca Laca-Chr7:141191783 Laca7g02965 Laca-Chr7:141216010 dispersed
Laca Laca-Chr7:141216010 Laca8g00709 Laca-Chr8:20999263 dispersed
Laca Laca-Chr7:141205358 Laca7g02965 Laca-Chr7:141216010 tandem