Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g02967 | ATGTCTATCGCCGATCACCGCCGTTCTCATTCAGATGGAAAGCCCTGGCGACTATGTCCGTTTTGGCAATCTGGAACACCTTCTTCGTCGTTTTCATCGACGCGGAATCTTCAATTTCAGGCTCAGAAAAGCCATGAAAATGGCGTCAAATCGAACCGTCGGACTTCCAGTAAGGTATCCTCGGTGGCGAAATCGCTCCTACCAGCTAGGCGAAGACTCCGCCTTGATCCGGCTAACAACCTTTATTTTCCTTATGAACCTGGTAAACAGGTGAGAAGTGCTGTTCGAATCAAGAACCATAGCAGCTCTCATGTCGCTTTTAAGTTTCAAACTACTGCACCAAAGAGCTGTTACATGCGACCTCCTGGTGGTATTCTGGCACCCGGAGAAACCATTATTGCTACAGTTTTCAAGTTTGTTGAGCAACCTGAGAAAAACGAAAAACAACCAAACCAAAGGAGTAAAGTTAAGTTCAAGATCATGAGCCTGAAAGTGAAAGAAGGAACAGACTATGTTCCCGAATTGTTTGATGAACAAAAGAATGAAGTAGTTGTTGAGCGAATTTTACGTGTTATTTTCTTGAATGCAGAACGTCCTACCCCTGCATTGGAAAAACTAAAGCATCAGTTGGCTGAAGCTGAAGCTGAATTAGAGATACGAAAAAAGCCTCCAGTTGACAATTCTCCAAAAGTTGTTGGCCAAGGGATGGTTATAGACGAATGGAAAGAAAGAAGGGAGAAATACCTTGCTCGACAACAGGTTGAGGGTGTAGATTTGTCATAA | 783 | 43.68 | MSIADHRRSHSDGKPWRLCPFWQSGTPSSSFSSTRNLQFQAQKSHENGVKSNRRTSSKVSSVAKSLLPARRRLRLDPANNLYFPYEPGKQVRSAVRIKNHSSSHVAFKFQTTAPKSCYMRPPGGILAPGETIIATVFKFVEQPEKNEKQPNQRSKVKFKIMSLKVKEGTDYVPELFDEQKNEVVVERILRVIFLNAERPTPALEKLKHQLAEAEAELEIRKKPPVDNSPKVVGQGMVIDEWKERREKYLARQQVEGVDLS | 260 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g02967 | 260 | ProSiteProfiles | Major sperm protein (MSP) domain profile. | 72 | 194 | IPR000535 | - | |
| Laca7g02967 | 260 | MobiDBLite | consensus disorder prediction | 32 | 63 | - | - | |
| Laca7g02967 | 260 | Pfam | MSP (Major sperm protein) domain | 73 | 181 | IPR000535 | - | |
| Laca7g02967 | 260 | Gene3D | Immunoglobulins | 68 | 196 | IPR013783 | - | |
| Laca7g02967 | 260 | SUPERFAMILY | PapD-like | 61 | 204 | IPR008962 | - | |
| Laca7g02967 | 260 | MobiDBLite | consensus disorder prediction | 32 | 46 | - | - | |
| Laca7g02967 | 260 | PANTHER | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN | 73 | 249 | IPR016763 | GO:0005789(PANTHER)|GO:0005789(InterPro)|GO:0005886(PANTHER)|GO:0061817(PANTHER)|GO:0090158(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g02967 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:15130767 | Laca7g02967 | Laca-Chr7:141244387 | dispersed |