Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g03017 | ATGGCGTCCATGGCTACCACCTTTGCCTCGTCTGTCTCCACAAAGACCAGGACCTCTTTCCTGGACCAATCATCGTTCCATGGCGTTCCGGTGGCTTCTCCGACGCGGATCCAACCAATCAAATCTAACCAAAGAAAGAACACACCGATCACCATGTCTGCTACCCCGTATGATCTCGGATCCTTCACCTTTAGTCCGATCAAGGAAGCGATCGTGTCTCGTGAAATGACGAGAAGGTACATGACTGATATGATTACCTATGCCGATACCGATGTCGTTGTAGTCGGCGCTGGCTCCGCTGGTCTCTCCTGTGCTTATGAGCTTAGCAAAAACCCTGACGTTCAGGTCGCCATCATCGAGCAATCTGTGAGCCCCGGAGGTGGAGCATGGCTCGGAGGTCAACTCTTCTCCGCCATGGTCGTCCGCAAGCCTGCACACCTCTTCCTCGACGAGCTTGAAATAGAGTACGACGAGCAAGAAGACTACGTAGTCATCAAGCACGCGGCTCTCTTCACCTCCACCATCATGAGCAAGCTCTTAGCCAGGCCAAACGTGAAGCTCTTCAACGCAGTAGCAGCCGAGGACTTAATCATCAAGGGAGGTAGAGTCAGTGGCGTTGTAACAAACTGGGCTTTAGTCGCAATGAACCACGACACACAATCCTGCATGGACCCAAATGTAATGGAGGCTAAAGTCGTTGTGAGTTCATGTGGACACGATGGACCCATGGGTGCTACAGGAGTGAAAAGGCTCCGAAGCGTTGGATTGATTGAGAGTGTTCCTGGGATGAAGGCTCTTGACATGAACGCTGCTGAAGATGCGATTGTGAAGTTGACTAGAGAGATTGTTCCTGGTATGATTGTTACAGGAATGGAAGTTGCAGAGATCGATGGATCTCCAAGAATGGGGCCGACGTTCGGGGCTATGATGATATCTGGACAGAAGGCTGCTCATTTGGCTTTGAGGGCTTTAGGGCTTCCGAATGCTTTGGATGGGACAAGTGTGGGAAGTGTTCATCCAGAGATGATTCTTGCTGCTGTTGATTCTGGTGAGACTGTGGATGCCTAA | 1068 | 51.03 | MASMATTFASSVSTKTRTSFLDQSSFHGVPVASPTRIQPIKSNQRKNTPITMSATPYDLGSFTFSPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPDVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGGRVSGVVTNWALVAMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGLIESVPGMKALDMNAAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALRALGLPNALDGTSVGSVHPEMILAAVDSGETVDA | 355 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g03017 | 355 | SUPERFAMILY | FAD-NAD(P)-binding domain | 52 | 317 | IPR036188 | - | |
| Laca7g03017 | 355 | FunFam | Thiamine thiazole synthase, chloroplastic | 89 | 324 | - | - | |
| Laca7g03017 | 355 | NCBIfam | sulfide-dependent adenosine diphosphate thiazole synthase | 69 | 323 | IPR002922 | - | |
| Laca7g03017 | 355 | Gene3D | - | 58 | 88 | - | - | |
| Laca7g03017 | 355 | PRINTS | Adrenodoxin reductase family signature | 115 | 128 | - | - | |
| Laca7g03017 | 355 | PRINTS | Adrenodoxin reductase family signature | 91 | 113 | - | - | |
| Laca7g03017 | 355 | PRINTS | Adrenodoxin reductase family signature | 259 | 272 | - | - | |
| Laca7g03017 | 355 | Gene3D | - | 89 | 324 | IPR036188 | - | |
| Laca7g03017 | 355 | PANTHER | THIAMINE THIAZOLE SYNTHASE | 11 | 354 | - | - | |
| Laca7g03017 | 355 | Hamap | Thiamine thiazole synthase, chloroplastic [THI4]. | 14 | 333 | IPR027495 | GO:0009228(InterPro) | |
| Laca7g03017 | 355 | Pfam | Thi4 family | 73 | 306 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g03017 | K03146 | cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 115652 | Laca5g00121 | Laca7g03017 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3763497 | Laca | Laca5g00121 | Laca-Chr5:5168678 | Laca7g03017 | Laca-Chr7:144205478 |