AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g03048 ATGGCGCTCCCTTCTTCTCCATCCACGTTCACCTGCAAAAACCTCTTCGCAATAACCCTAATTATCGTCTTCCTCCTTTCTTGTTGTACCCACAGTCCACGAGTACAAGCCCTTAAAGCACCAATCAGACCACAAGACATACTCCCACTTTTACCCCGCCAAGTTTCATGGCCTATTCTCAACACTTTCCGAGGCGCCGCCGATCTTCTGCCGAGCTTCGTCGGAGCAGCGGCTATTGCAAATAATTCGCTGTTGCATTGGAAAGGGTCTTGCTTTTATGAGAACACTGCGTGGTTAGAGCTTCATAACAAAAGTGGTAGTGAATTTGGTGGAGGCACTCTTCATATCAAGGTAAGCAAGGCACACAGTTGGACATGTATGGATATTTACGTCTTTGCCACTCCATATCGTGTGACATGGGACTACTATTTCATATCCCGTGAGCATACCCTTGAGTTTGATGAGTGGGGAGGGAAAGCCGAGTACGAATATGTAAAACGTAAAGGAGTTTCAATTTTCCTCATGGAAGCCGGGATGATAGGAACCCTAGAAGCATTATGGGAGGTTTTCCCTCTTTTCACAAACACCGGATGGGGGGAAACTTCTAATCTTGCTTTTCTCAAAAAACATATGGGAGCTAATTTTGAAGAAAGATCCGGGCCATTTGTAACAAATGTTACGGTTGATGATATACACTCGGGTGACTTTCTTGCAATATCAAAGATCCGCGGGCGATGGGGCGGGTTTGAGACCCTTGAAAAATGGGTATCCGGGGCGTATGCGGGTCATTCTGCTGTTTGCTTGAGGGACCCGGATGGGAATCTATGGGTCGGGGAATCTGGACATGAAGACGATGAGGGTCAAGATGTAATTGCTTTATTGCCATGGGACGAATGGTGGGAATTTGAGGTGACAAAAGATGATTCTAATCCGCATATCGCATTGCTTCCTTTACATCCCGACCTTCGCTCAAAGTTCAATGAGACTGCAGCATGGGAGTATGCACAAAGCATGATAGGGTTGCCATATGGTTATCATAATTTAATATTTAGTTGGATTGACACCATCAGTGATAACTACCCACCACCGTTGGATGCTAATCTGGTTGCTTCAGTTATGACCGTGTGGAATCAACTGCAGCCTGCATATGCGGCTAATATGTGGAACGAAGCCTTGAATAAGCGGCTTGGTACTAAGGGTCTTGATCTTCCAGATATTTTAGTCGAAGTTGAAAAGCGTGGTTCGTCTTTTGCTGAATTATTGACTATTCCTGAACAAGATGATTGGGTTTATGCTGATGGAAAGTCAACTTCTTGTGTTGCGTTTGTCCTTGAAATGTATAAGGAAGCCGGACTTTTTGGGAATCTTGCAAGTGAAATCCAAGTTACCGAGTTCACAATAAAGGATGCGTACATGCTCAACTTTTTTGAAGACGATTTGAGTCGTTTGCCAAAGTGGTGTAACGAAGGGGACACAGTAGAGCTTCCATTTTGTCAAATCAAAGGCAAGTATCGAATGGAACTTCCCGGATACAATACTATGAATCCATACCCTTATATGACCGAAAATTGCCCATCACTACCTCCGGACTATTTTAGGCCGGAATACTGCTAA 1614 44.49 MALPSSPSTFTCKNLFAITLIIVFLLSCCTHSPRVQALKAPIRPQDILPLLPRQVSWPILNTFRGAADLLPSFVGAAAIANNSLLHWKGSCFYENTAWLELHNKSGSEFGGGTLHIKVSKAHSWTCMDIYVFATPYRVTWDYYFISREHTLEFDEWGGKAEYEYVKRKGVSIFLMEAGMIGTLEALWEVFPLFTNTGWGETSNLAFLKKHMGANFEERSGPFVTNVTVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPDGNLWVGESGHEDDEGQDVIALLPWDEWWEFEVTKDDSNPHIALLPLHPDLRSKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNYPPPLDANLVASVMTVWNQLQPAYAANMWNEALNKRLGTKGLDLPDILVEVEKRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGNLASEIQVTEFTIKDAYMLNFFEDDLSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTMNPYPYMTENCPSLPPDYFRPEYC 537
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g03048 537 PANTHER OS01G0793500 PROTEIN 16 537 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g03048 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3726304 Laca Laca4g00208 Laca-Chr4:8137249 Laca7g03048 Laca-Chr7:144865499
3756467 Laca Laca7g03048 Laca-Chr7:144865499 Laca8g04506 Laca-Chr8:226507755