AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g03053 ATGGGTTGGAGGAATGAAGAAGATGAAAGAAGATCACCATCATCATCGCCACTGGTAAACGATGCCTTGCTTTTAACAACCATGTGTATCATTGGCCTCTCTGTTGACGTTCACATCAAGGATGGGTCCATCTATTCTGGAATCTTTCACACTGCCTGTGTTGACGACCGTTATGCTATTGTGTTGAAGCAAGCAAGGATGATCAAGAAGGGGAGTTGTGATTCAAATGTGGCAAACGAGGGGGTGATAGGAACACTTATAATTCAATCAGAGGATCTTGTCCAAGTGGTTGCTAAGAGAGTAGTGCTTCCAGCAGATGGTTTTGCTGGACATGAAACAGGGGATGATACAGGGGCAGTTGCATGCTCTTTCCCTTCTAATGGAACTCAACTGACTGAAGGAAATAAAACAATGTCCACAAAGTCAAACGTTGACCAACCTCAAGCTAATCAAACAAAATGCTTGTCTGGAACTGACAACGGGTTTCCTACTCACTCAACCAATAATACTCTTGAAGTCAATAAAAATGCAGATGCTAAAGTTTCTACAAAGAAAGAAGAAGCTTTGAAGGATTCAGATGATAACAGAAAGAAGAAAAGTTATCAAAGTAATGGGGTGAAAACCAACAACCAAAAGGAATCAATTATGAGTTCATCATCATCTCCAACCGAAACCATCACTTCAAAAATCCCAAATTCTAATCAAACTGCTAAGGAATTTAAACTTAATCCAGGAGCAAAAATATTTTCTCCTTCGTTTCCAAATAAAAGATCAGCTACTCCTCCGGTGATACCCACCGGAGCAAATCTTGCATACGTTCAGGACGGTTATCCGGCGGTACAAGTGGCGGCACCACCACCGGAAGTTGAAATCAGCCCGTATGCTCCTCGTTCTTTACCGGTTAAGTTTTTTCCGTATGGTGGAAATGGAGGTGGCGATGTACAACAACATCATCCTCCACCTATTGTTGGATATATGACAAATAGAGGTCAACCGGTTAGATATAGTAATCAATATCAAACTACACCAACCTATGTTCAACCCGCCACTCAAAATGTAATGGTTGGAAGATTTGGACCGGTTGTCTATGTTCATCCAGTCTCTCAAGATGTGGTCCCGAGCACGACGGGTTTCTCTCAAGTGAATACATGCTCTATCTTGACTCCACACCAAGTACATGTCCCTAAACACCAAGGAAGTGCAGCAGCCCAAGCATTGCAGCTATGTGCAACACCACCATTTATATCCGCCGCCGGTGGTGGTGGTGGTCAAACCCCGTTTATGTTACCGGGCCACCACATTCCCATTTCACAACCGCCTTACCCCATCATCCGCCCAATGCCGCTCCCTGGATCTAATGCTTTTTTAGTATCAAAGTTTTCTTGA 1386 43.36 MGWRNEEDERRSPSSSPLVNDALLLTTMCIIGLSVDVHIKDGSIYSGIFHTACVDDRYAIVLKQARMIKKGSCDSNVANEGVIGTLIIQSEDLVQVVAKRVVLPADGFAGHETGDDTGAVACSFPSNGTQLTEGNKTMSTKSNVDQPQANQTKCLSGTDNGFPTHSTNNTLEVNKNADAKVSTKKEEALKDSDDNRKKKSYQSNGVKTNNQKESIMSSSSSPTETITSKIPNSNQTAKEFKLNPGAKIFSPSFPNKRSATPPVIPTGANLAYVQDGYPAVQVAAPPPEVEISPYAPRSLPVKFFPYGGNGGGDVQQHHPPPIVGYMTNRGQPVRYSNQYQTTPTYVQPATQNVMVGRFGPVVYVHPVSQDVVPSTTGFSQVNTCSILTPHQVHVPKHQGSAAAQALQLCATPPFISAAGGGGGQTPFMLPGHHIPISQPPYPIIRPMPLPGSNAFLVSKFS 461
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g03053 461 PANTHER ATAXIN 2-RELATED 151 432 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Laca7g03053 461 MobiDBLite consensus disorder prediction 131 177 - -
Laca7g03053 461 MobiDBLite consensus disorder prediction 131 230 - -
Laca7g03053 461 MobiDBLite consensus disorder prediction 202 230 - -
Laca7g03053 461 MobiDBLite consensus disorder prediction 178 201 - -
Laca7g03053 461 Pfam Ataxin 2 SM domain 20 99 IPR025852 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g03053 - -