AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g03056 ATGGTGGATTTTGAAGCACCTTCATTCTCTTTAGGGCTTGATTATGACCTACTCGATTCAGAGCCCCAAATCACTTCTGTAAGTGAAGATGATGATTATGAAACTCTAATTGTCGATGATTCGGAGCCTGAATATTCGGATCCTCCTCCGAAGTCGAAGCGCCTCCGGCGTGTACTTACCAACGATGTGACAACATCATCAACGGTTTCAGCCAATCCTGAGGTGGCATTGCGTTCCAGTGCGGTTGTTGATGATGAAGATGATGACGTGTTCTGTTCAAAGGAGGATATGCGTACTGATGAACATCTGCATACACAAAACCATCCTCTCTCCACCAGTTCAAAGTTACCAAGCACGCCAGGAGTTTTGACTAGTCAACCAGGAAACGAAAGTCAAACTTTCCGTCCTCGTAGACGACTTCTGTTGACTGGTTCTGACTCTGATTCAGATGATCCTTCTGTCAGTGACAATGTTAATAATAACAAATGTAACATATCAGAATCAATTGATTTATCCACTACAAAAAGAGAAAGTCCATGTGAAGATTTCAGATCAGAGAAAAGTTCATTACATTTTGATGACTCTCTTCCTCCTGCTGTTCGTTACTTTTTTCACGATGATTTAAGAATCCAAGAGCTTGTTCAAAGTCGCCTTCCTAATTTTTTTCCTCTGTGTAAAATTTCAAATAGAGAGCTTGAGCAACCCAGCACATCAGAAATCGATTACATGGGTCAATTTAAGTGTGGTGCAAGCTCAAAAGAAGGTGTTAGAGATATTAAAGACAAGAAAAGCTCAAAAAGTAGGAGTAAAATTTCAAGAAAAGAGAATGTTGAAGAGACATCACAAGGATGGGTGAACCCAAAGCTTTGTGTTGATAACAAGATTATAACAAAAAACACTCCAAAAAGAAAGACTCATGCAGCTCAACAATCTGCTGGATATTGGGTAACAGGTCAAGATGGAAAAAGGGTTTATGTTGGTAAAAGGGGTCAGGAGCTGACTGGACGAGTTGCTTACATGCAGTACAAAAAGGAGAGTGGATCATGGTTTAAAAAGGCAAAGAGGAAATCTGCTAAGAAGAATAAATGA 1089 39.94 MVDFEAPSFSLGLDYDLLDSEPQITSVSEDDDYETLIVDDSEPEYSDPPPKSKRLRRVLTNDVTTSSTVSANPEVALRSSAVVDDEDDDVFCSKEDMRTDEHLHTQNHPLSTSSKLPSTPGVLTSQPGNESQTFRPRRRLLLTGSDSDSDDPSVSDNVNNNKCNISESIDLSTTKRESPCEDFRSEKSSLHFDDSLPPAVRYFFHDDLRIQELVQSRLPNFFPLCKISNRELEQPSTSEIDYMGQFKCGASSKEGVRDIKDKKSSKSRSKISRKENVEETSQGWVNPKLCVDNKIITKNTPKRKTHAAQQSAGYWVTGQDGKRVYVGKRGQELTGRVAYMQYKKESGSWFKKAKRKSAKKNK 362
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g03056 362 MobiDBLite consensus disorder prediction 59 74 - -
Laca7g03056 362 MobiDBLite consensus disorder prediction 25 41 - -
Laca7g03056 362 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 132 - -
Laca7g03056 362 MobiDBLite consensus disorder prediction 106 138 - -
Laca7g03056 362 MobiDBLite consensus disorder prediction 257 279 - -
Laca7g03056 362 MobiDBLite consensus disorder prediction 146 163 - -
Laca7g03056 362 MobiDBLite consensus disorder prediction 44 58 - -
Laca7g03056 362 MobiDBLite consensus disorder prediction 257 277 - -
Laca7g03056 362 MobiDBLite consensus disorder prediction 22 74 - -
Laca7g03056 362 MobiDBLite consensus disorder prediction 96 163 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g03056 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
116429 Laca7g03056 Laca9g03031
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3764385 Laca Laca7g03056 Laca-Chr7:144978933 Laca9g03031 Laca-Chr9:122802294