Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Laca7g03081 | ATGGCAAGGCGCAATCACATGGATGATCCGGTTGCAATTCGTCTTGTCGTTTGGAAGAAAAAGGATGAGGAAGAAGATGCCATCGATCGATCTAGGTTGTTAGCCATGAATAGTAATCCAGCTACGCCGATGAACGCAAATGCTCCGTCGTCAAGCTCCGGTGGCGCTGGATCCCCCGATTCAACTGCTCCAAGGAGAAATTCGAAACGACCTAAATATTCTAGGTTTACACAACAGGAGCTTCCGGCATGTAAGCCAATTCTGACTCCAAAATGGGTGATTTCAGCTTTCATGCTTGTAACCATTGTCTTCATACCAATAGGACTTGCTTCCCTCTTTGCTTCTCGTGATGTAGTTGAAATCATTGACCGATACGATAATGCCTGCGTACAAGGGTCAAAAAGTCAAAAGGTGGAATATATACAATCCAATGCAAGTAAGACCTGCACAAGAACCTTGACAGTCACAAAGCGTATGAAGCAGCCTATATACGTGTACTACCAACTGGACAATTACTACCAGAATCATCGGAGGTATGTGAAGAGCCGAAGTGATCAGCAATTAAGAAACCGTGGTGATGAAAATGACACAAGTTCATGTAAGCCTGAACATAATGCAAATGGGATGCCAATTGTGCCATGTGGACTTGTAGCATGGAGTTTATTCAATGACACCTATGCATTCTCCACCAGAAACAACCAATCATTACCCGTAAACAAGAGACATATTTCATGGAAAAGTGACAGAGAGGACAAATTTGGCAGTGATGTTTTCCCAAAAAACTTCCAAAATGGAAGTCTTATTGGTGGTGCACATCTCAACGAGTCCATACCATTAAGTGAGCAGGAAGACCTTATTGTGTGGATGAGAACTGCAGCTCTCCCAACTTTTAGAAAATTGTATGGAAAAATAGAAGTGGATATTGAAGCAGGAGAAACTATAACTGTTGTATTAGAGAACAACTACAACACTTATAGCTTTAGTGGCAAGAAGAAACTTGTGCTTTCAACCACAAGTTGGCTTGGAGGAAAGAATAACTTTATTGGCATCGCGTATCTTGCTGTTGGTGGATTGTGCTTCATACTAGCTACAACTTTCACTCTCATATATTTAGTTAAACCAAGGCATCTTGGAGATCCGAATTATTTGTCATGGAACAGAAACCCAGGTGGTCATTGA | 1179 | 41.73 | MARRNHMDDPVAIRLVVWKKKDEEEDAIDRSRLLAMNSNPATPMNANAPSSSSGGAGSPDSTAPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLASLFASRDVVEIIDRYDNACVQGSKSQKVEYIQSNASKTCTRTLTVTKRMKQPIYVYYQLDNYYQNHRRYVKSRSDQQLRNRGDENDTSSCKPEHNANGMPIVPCGLVAWSLFNDTYAFSTRNNQSLPVNKRHISWKSDREDKFGSDVFPKNFQNGSLIGGAHLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEVDIEAGETITVVLENNYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCFILATTFTLIYLVKPRHLGDPNYLSWNRNPGGH | 392 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Laca7g03081 | 392 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 64 | 384 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Laca7g03081 | 392 | PIRSF | Lem3-Cdc50 | 42 | 388 | IPR005045 | GO:0016020(InterPro) | |
| Laca7g03081 | 392 | Pfam | LEM3 (ligand-effect modulator 3) family - CDC50 family | 112 | 375 | IPR005045 | GO:0016020(InterPro) | |
| Laca7g03081 | 392 | MobiDBLite | consensus disorder prediction | 23 | 75 | - | - | |
| Laca7g03081 | 392 | MobiDBLite | consensus disorder prediction | 182 | 204 | - | - | |
| Laca7g03081 | 392 | MobiDBLite | consensus disorder prediction | 35 | 64 | - | - | |
| Laca7g03081 | 392 | MobiDBLite | consensus disorder prediction | 182 | 200 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Laca7g03081 | K26935 | cell cycle control protein 50 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Laca | Laca-Chr7:84782060 | Laca7g03081 | Laca-Chr7:145549846 | dispersed | |
| Laca | Laca-Chr7:145549846 | Laca8g04505 | Laca-Chr8:226505880 | dispersed |