AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g03185 ATGGCGATATTCGCGGGAAAATGCATTTATGGCGCTGCATTTGAGCTTCAGTCCAGAGTTTTCGTGAAGCCATGGGCGACGATGATTATAGTCCGATGTTGTTCGAATTCGGATGAAAGCTCCATGAATTTCCCAGTTAGATCCAGTATAGGATTTTCTGTGCACGAGAAATCACTGGATAACGATTTTAAGGAAGGCCATGTTATATCAAAAGAAAAGAAAACTTGTAATTCAAATGTGAGATTAGAGGTCGGAGAGCCTGATTACAAATCTGATGAATTTGATGCCATGGAAGGTCTCGATGAGGATTTAGATGGACATGATTCTCTTAATGGAGAATACGAAATCAAAAATCTCACAATTAAAACTAAAGAAGAAGCTGAGAAGACAGCAATTAGATTGCTTGGTGCAAGAGCATATACAGCACTTGAACTGAAGAAGAAACTGATAGGAAAGAAATTCTCCCATGAAGTTGTGAATGCTGTGATTTCTGACTTCCAAAACAGAGGATTTATCAATGATTTGTTGTATGCTGAATCGTTTTCTCGATCAAGATGGTCTTCATCGAGTTGGGGTCCACGTAGGATCAAGCAGGCATTGGCCAAAAAGGGAGTTAATGATGTGGATGCACAGAAAGCAATAAAAGTGGTGTTAGAAGATGGGGAAACTGTTTCAAGATTTGGGTTATCAAAGCCATCAATGGATCATCTGTTTGCCCAAGTTTCAAAGCAATGGCTTCGTGCTAAAGACCTGCCGACTGAAAAACAAAAATCAAGAATCATCAATTGGCTTCAATACCGTGGCTTTAATTGGGGCGTTATTAACTTTATTTTAAAAAAGCTACAATCCGAGCATCCTCCTTAA 864 39.24 MAIFAGKCIYGAAFELQSRVFVKPWATMIIVRCCSNSDESSMNFPVRSSIGFSVHEKSLDNDFKEGHVISKEKKTCNSNVRLEVGEPDYKSDEFDAMEGLDEDLDGHDSLNGEYEIKNLTIKTKEEAEKTAIRLLGARAYTALELKKKLIGKKFSHEVVNAVISDFQNRGFINDLLYAESFSRSRWSSSSWGPRRIKQALAKKGVNDVDAQKAIKVVLEDGETVSRFGLSKPSMDHLFAQVSKQWLRAKDLPTEKQKSRIINWLQYRGFNWGVINFILKKLQSEHPP 287
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g03185 287 Gene3D - 232 286 IPR036388 -
Laca7g03185 287 PANTHER REGULATORY PROTEIN RECX FAMILY PROTEIN 13 286 IPR003783 GO:0006282(InterPro)
Laca7g03185 287 Gene3D - 173 215 IPR036388 -
Laca7g03185 287 Gene3D - 126 171 IPR036388 -
Laca7g03185 287 Pfam RecX, second three-helix domain 173 213 IPR053924 -
Laca7g03185 287 Hamap Regulatory protein RecX [recX]. 99 285 IPR003783 GO:0006282(InterPro)
Laca7g03185 287 Pfam RecX, third three-helix domain 235 278 IPR053925 -
Laca7g03185 287 Pfam RecX, first three-helix domain 130 164 IPR053926 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g03185 K03565 regulatory protein