AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Laca7g03192 ATGGAGCTGGTGCCTTATTCTGATCCTAACACCAACGCCAACTCCAACTCCAACTCCTCACCACCGTGGCAAGACATGTTCCGATCAGCCTCCACCCGTCAACCAGATCCATCTCCCGAACCCCAACCTCAGTTACCGCCGGAATCCACCACCAATCCGGATAGGGATGACTCCACTTCTCTCTCCGGCGACTCTCAGGTTCGTCTCGCACTATACATAGCCATGGCACACGCCGGCTTAGTTTTTGCTATTGTTATTATCTACGGCGTTTCTAAATTACTTGAAGAATATCTTCGCCCGATTCTCTGGGCTGTTCTATGTTCGATTCCTCTTCGAGGAATTCAGAAATCCCTAGTTTCGTTTTGGTCTGAACCTTTGGAATTAGGTCTTACAGAAACTGTACTAGCTATACCTGTATCCGTGTATAGAGTTTTCACCGGGAGTCTCGTTGAGATCAGAGAATTTTTATATGAACTAATCCTTCGTAAGAAGAAGACAAGAGATGTTGCGAAGCGAAAACGAAGTGGGTTTTCAATTTTATTGAGATGGTTGGTGTCGTTTTGGGTTTTTGTAATGGCTTACGAACAACTTGGTGTTCTTGGTGCCATCACTTTGTTAGCGTTAGGGTTCATGTTTACATCCAGGCATGCCAAATCCACCATGGCTGCTGTTTCTTCGTTTGGAGGTCGTACTTTGAACCATAATCGGCATGCAGCTTTCCTCACCAGCCGGATTTTGAATCAATTGGAGACAATTGTGGCAATTGGATTGATTGTTGGTATGATTGTGGGGTCTCTAACTGGGACCCTGCTTTTCTCATACAAAATTGGAGTTGAAGGAAAAGATGTGGTTTATTCCATAAAAACCCATGTGGAAAAAAACAATATAGCTGAGAAAATCGGGTTAAAAAAATGGATGGATGACAACAACGTGCCATTAATGGTGGATAAATACAGCACTCAGTTTTATGAAACTGTAAATGTACAAATCGATACTTTAGCAATGCAGTATAACGTGACTGAAATCGTTCAAGAAATGAAACATATCATCATACCACGTATTATAAACCCCTCAAATTCATCCACACCTTCAACTGCAATAGCAATCCCAAACCCGTACACAGAAAAGATACAAACTTTGACAAAAAAAGTTGTAAACCGCGAATGGGCAGAGATTTATCCAGAAGTAAACGGATTGTTCAAAGACGCGCGTGTGCGTGTCAATAGGGAAGATATGATCAAGAATGCAAAAGCAATTGCTTTTCAAGGAAAAGATATTCTTCAACGTGTTCTTTCTAGTAGTAAATCCATTGTTGGTGGTAGTACAAAGCTTGTTTTTGTAGTTGTTGAATCCATTGTTTCAGGGGCAGCTGGTATTTTAAATTTTGTATCCCAATCGATGGTTTTCACAGGGGTTTTGTACTCTTTGATTACATCGGATGCAGGTGGGGTTACTGAACAAGTTATGTACATGATTCCTATTTCAAGATCTGCTAGAACAGGAGCTGTTGAGGTTCTTGATAAAGCTATTTCTGGGGTTCTTTTAGCTACAGCTGAGATTGCGTTTTTTCAAGGCTGTCTTACTTGGCTTTTGTTTAGATTGTTTAATATTCATTTTTTGTACATGTCGACATTTCTTGCGTTTATCAACCCTTTACTCCCGATATTCCCAAATTTCTTCTCCACAATTCCAGCTGCATTGCAATTGGTTTTAGAAGGGAGATATGTTGTTGCTGTTTGTTTGTCCATTATTCATCTTTTGCTTATGGATTATGGTACTACTGAGATTCAAGAAGACATACCTGGTCATAGTGCTTATCTTACTGGACTTAGCATCATTGGTGGAGTTGCATTATTCCCATCTGCATTGGAGGGAGCGATAATGGGGCCTTTGATAACAACTGTTGTTGTTGCTCTTAAGGATTTGTATGTAGAATATGTTTTGGGTGAACCAGAGAAAGGGAAAAAGGACTAA 1974 40.68 MELVPYSDPNTNANSNSNSSPPWQDMFRSASTRQPDPSPEPQPQLPPESTTNPDRDDSTSLSGDSQVRLALYIAMAHAGLVFAIVIIYGVSKLLEEYLRPILWAVLCSIPLRGIQKSLVSFWSEPLELGLTETVLAIPVSVYRVFTGSLVEIREFLYELILRKKKTRDVAKRKRSGFSILLRWLVSFWVFVMAYEQLGVLGAITLLALGFMFTSRHAKSTMAAVSSFGGRTLNHNRHAAFLTSRILNQLETIVAIGLIVGMIVGSLTGTLLFSYKIGVEGKDVVYSIKTHVEKNNIAEKIGLKKWMDDNNVPLMVDKYSTQFYETVNVQIDTLAMQYNVTEIVQEMKHIIIPRIINPSNSSTPSTAIAIPNPYTEKIQTLTKKVVNREWAEIYPEVNGLFKDARVRVNREDMIKNAKAIAFQGKDILQRVLSSSKSIVGGSTKLVFVVVESIVSGAAGILNFVSQSMVFTGVLYSLITSDAGGVTEQVMYMIPISRSARTGAVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLFNIHFLYMSTFLAFINPLLPIFPNFFSTIPAALQLVLEGRYVVAVCLSIIHLLLMDYGTTEIQEDIPGHSAYLTGLSIIGGVALFPSALEGAIMGPLITTVVVALKDLYVEYVLGEPEKGKKD 657
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Laca7g03192 657 PANTHER TRANSMEMBRANE PROTEIN 26 653 IPR002549 -
Laca7g03192 657 MobiDBLite consensus disorder prediction 7 35 - -
Laca7g03192 657 MobiDBLite consensus disorder prediction 1 62 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Laca7g03192 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
115632 Laca5g00040 Laca7g03192
116443 Laca7g03192 Laca9g02882
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Laca Laca-Chr5:2133650 Laca7g03192 Laca-Chr7:149298654 wgd
Laca Laca-Chr7:149298654 Laca9g02882 Laca-Chr9:117166293 wgd